| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra036698 |
| Family | GT21 |
| Protein Properties | Length: 577 Molecular Weight: 65084.4 Isoelectric Point: 8.5122 |
| Chromosome | Chromosome/Scaffold: 09 Start: 5562958 End: 5568537 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT21 | 168 | 397 | 1.1e-32 |
| PRVSVVMPLKGFGEHNLHNWRSQITSLYGGPLEFLFVLESTQDPAYHAVSRLLSTYQDHIEAKVVVAGLSTTCSQKIHNQLIGVEKMHKDTKYVLFLDDD VRLHPGTIGALTSEMEKNPEVIFIQTGYPLDLPSGTLGSYCIYEYHMPCSMGFATGGRTFFLWGGCMMMHADDFRQDRYGVVSGLRDGGYSDDMTLASLA GAHKRLITSPPVAVFPHPLASDLSFGRYWN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MNRNMEKEAT TKNLPESEIS PNEVTIEVIV KGELDGKVSC SRKKAAPVNG DLLNLTPLEK 60 NSKSRVPHFA PSSPVLLDVE RERERRGMST LESILFSLSR AFCTPFAVFL HIQGCVICLL 120 LALGWLMAAY VRNREIRRIK NSMKAGNSLA FLSQDINELE HSRQVQLPRV SVVMPLKGFG 180 EHNLHNWRSQ ITSLYGGPLE FLFVLESTQD PAYHAVSRLL STYQDHIEAK VVVAGLSTTC 240 SQKIHNQLIG VEKMHKDTKY VLFLDDDVRL HPGTIGALTS EMEKNPEVIF IQTGYPLDLP 300 SGTLGSYCIY EYHMPCSMGF ATGGRTFFLW GGCMMMHADD FRQDRYGVVS GLRDGGYSDD 360 MTLASLAGAH KRLITSPPVA VFPHPLASDL SFGRYWNYLR KQTFVLESYI SKANWIMNKL 420 LFAVHCYLSW GFVASYIMAV IHITSALRIY TKGYHQLEDT TFASCGMSLV ILLAICTFIE 480 LLSMWNLTRR EVTLCNLLSP EAPRLSLAPY NWGLIFIAML VDNFLYPISA FRSHFSQSIN 540 WSGIRYHLRN GKVFKIERRN DMVPVMTDLG HRKLPS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13632 | Glyco_trans_2_3 | 6.0e-6 | 260 | 440 | 188 | + Glycosyl transferase family group 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis. | ||
| pfam13641 | Glyco_tranf_2_3 | 3.0e-7 | 168 | 342 | 181 | + Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. | ||
| cd02520 | Glucosylceramide_synthase | 2.0e-8 | 168 | 288 | 124 | + Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. | ||
| COG1215 | COG1215 | 3.0e-10 | 167 | 560 | 414 | + Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | ||
| pfam13506 | Glyco_transf_21 | 5.0e-11 | 226 | 400 | 179 | + Glycosyl transferase family 21. This is a family of ceramide beta-glucosyltransferases - EC:2.4.1.80. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK73021.1 | 0 | 87 | 574 | 4 | 489 | AF367245_1 ceramide glucosyltransferase [Gossypium arboreum] |
| GenBank | AAL11579.1 | 0 | 88 | 574 | 1 | 488 | AF424585_1 At2g19880/F6F22.9 [Arabidopsis thaliana] |
| GenBank | ABK95617.1 | 0 | 90 | 574 | 4 | 486 | unknown [Populus trichocarpa] |
| RefSeq | NP_565460.1 | 0 | 88 | 574 | 1 | 488 | ceramide glucosyltransferase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002514215.1 | 0 | 87 | 574 | 6 | 491 | ceramide glucosyltransferase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sphingolipid biosynthesis (plants) | RXN-7793 | EC-2.4.1.80 | ceramide glucosyltransferase |
