| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra036914 |
| Family | GH1 |
| Protein Properties | Length: 328 Molecular Weight: 37691.1 Isoelectric Point: 7.1743 |
| Chromosome | Chromosome/Scaffold: 01 Start: 12113863 End: 12115671 |
| Description | glucoside glucohydrolase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 1 | 317 | 0 |
| MKEIGVDAYRFSVAWSRIIPRGKASRGVNEEGIGYYNNLINGLVSKGIKPFVTLFHWDLPQTLQDEYEGFLDHQIIEDFKSYAEICFQRFGDRVKNWITI NQPYTIPTRGYATGTDAPGRCSAWLNKNCYEGDSATEPYIVAHHVLLAHATVVNLYRQKYQLIQAGEIGITMITRWFLPYNNSDENLKAVERAKEFFHGW FMDPLTKGHYPLIMKQILKERLPRFTTIEALLVKGSYDFIGVNYYMTQFAKAVPPANPNKLSVMTDSQVDLSYVNEDGPISRCPFGDVYYRPRGILDVLE YFKTNYGNPKVYITENG | |||
| Full Sequence |
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| Protein Sequence Length: 328 Download |
| MKEIGVDAYR FSVAWSRIIP RGKASRGVNE EGIGYYNNLI NGLVSKGIKP FVTLFHWDLP 60 QTLQDEYEGF LDHQIIEDFK SYAEICFQRF GDRVKNWITI NQPYTIPTRG YATGTDAPGR 120 CSAWLNKNCY EGDSATEPYI VAHHVLLAHA TVVNLYRQKY QLIQAGEIGI TMITRWFLPY 180 NNSDENLKAV ERAKEFFHGW FMDPLTKGHY PLIMKQILKE RLPRFTTIEA LLVKGSYDFI 240 GVNYYMTQFA KAVPPANPNK LSVMTDSQVD LSYVNEDGPI SRCPFGDVYY RPRGILDVLE 300 YFKTNYGNPK VYITENGKYV MIVEELF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 6.0e-83 | 1 | 318 | 319 | + beta-glucosidase | ||
| TIGR03356 | BGL | 3.0e-83 | 1 | 317 | 318 | + beta-galactosidase. | ||
| PLN02814 | PLN02814 | 9.0e-89 | 1 | 318 | 322 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 3.0e-95 | 1 | 318 | 323 | + beta-glucosidase | ||
| pfam00232 | Glyco_hydro_1 | 8.0e-118 | 1 | 317 | 320 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD40134.1 | 0 | 1 | 317 | 105 | 421 | AF149413_15 Arabidopsis thaliana thioglucosidase (GB:X79195); Pfam PF00232, Score=702.5, E=1.9e-207, N=1 |
| GenBank | AAV71147.1 | 0 | 1 | 317 | 103 | 419 | myrosinase [Armoracia rusticana] |
| DDBJ | BAE98479.1 | 0 | 1 | 317 | 116 | 432 | myrosinase TGG2 [Arabidopsis thaliana] |
| RefSeq | NP_001031940.1 | 0 | 1 | 317 | 116 | 432 | TGG2 (GLUCOSIDE GLUCOHYDROLASE 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| RefSeq | NP_568479.1 | 0 | 1 | 317 | 116 | 432 | TGG2 (GLUCOSIDE GLUCOHYDROLASE 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1dwj_M | 0 | 1 | 317 | 84 | 409 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1dwi_M | 0 | 1 | 317 | 84 | 409 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1dwh_M | 0 | 1 | 317 | 84 | 409 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1dwg_M | 0 | 1 | 317 | 84 | 409 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 1dwf_M | 0 | 1 | 317 | 84 | 409 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| glucosinolate breakdown | RXN-8134 | EC-3.2.1.147 | thioglucosidase |
| glucosinolate breakdown (via thiocyanate-forming protein) | RXN-12024 | EC-3.2.1.147 | thioglucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG520295 | 265 | 1 | 265 | 0 |
| EG481640 | 249 | 1 | 249 | 0 |
| EG525046 | 279 | 1 | 278 | 0 |
| CX192297 | 261 | 1 | 258 | 0 |
| BG645997 | 266 | 4 | 269 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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