| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra037137 |
| Family | AA1 |
| Protein Properties | Length: 542 Molecular Weight: 60563.1 Isoelectric Point: 9.6763 |
| Chromosome | Chromosome/Scaffold: 09 Start: 4304466 End: 4306692 |
| Description | SKU5 similar 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 50 | 499 | 0 |
| QQVILINGQFPGPKLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNFTYKFQTKDQIGTYNYFPSTAFHKAAGGFGAINVY ARPRIPIPYPLPVEDFTLLIGDWFKTNHKTLQQRLDSGGVLPFPDGMLINGQTQTTFTGDQGKTYMFRISNVGLSSTFNFRIQGHTMKVVEVEGSHVMQT DYDSLDVHVGQSLSLLVTLNQSPKDYYIVASTRFVRSNLSVTALLRYSNSGVPASGDMPPLPPGELVWSMRQARTFRWNLTANAARPNPQGSFHYGKINT TKSFVFSNSAPLINGKQRYAVNGVSYVNSDTPLKLADHFNIPGVFSTSAIQSVPSNSPATVATSVVKASLHDFLEIVFQNNEKAVQSWHLDGYDFWVVGF GSGQWTPAKRPLYNLVDALTRHTTQVYPNSWTAILVSLDNQGMWNMRSAV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 542 Download |
| MAFRTRLYLL HLLVALALLS SLVIVKGESP YKFYTWTVTY GIIYPLGVPQ QVILINGQFP 60 GPKLDVVTND NIILNLINKL DQPFLLTWNG IKQRKNSWQD GVLGTNCPIP PNSNFTYKFQ 120 TKDQIGTYNY FPSTAFHKAA GGFGAINVYA RPRIPIPYPL PVEDFTLLIG DWFKTNHKTL 180 QQRLDSGGVL PFPDGMLING QTQTTFTGDQ GKTYMFRISN VGLSSTFNFR IQGHTMKVVE 240 VEGSHVMQTD YDSLDVHVGQ SLSLLVTLNQ SPKDYYIVAS TRFVRSNLSV TALLRYSNSG 300 VPASGDMPPL PPGELVWSMR QARTFRWNLT ANAARPNPQG SFHYGKINTT KSFVFSNSAP 360 LINGKQRYAV NGVSYVNSDT PLKLADHFNI PGVFSTSAIQ SVPSNSPATV ATSVVKASLH 420 DFLEIVFQNN EKAVQSWHLD GYDFWVVGFG SGQWTPAKRP LYNLVDALTR HTTQVYPNSW 480 TAILVSLDNQ GMWNMRSAVW ERQYLGQQFY LKVWDPVQSL ANEYNPPDNL LLCGKAIGRH 540 L* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 0 | 24 | 540 | 517 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 24 | 538 | 525 | + copper ion binding / oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 24 | 540 | 518 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 25 | 541 | 522 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 29 | 535 | 523 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61328.1 | 0 | 23 | 541 | 28 | 546 | pectinesterase-like protein [Arabidopsis thaliana] |
| DDBJ | BAB08634.1 | 0 | 23 | 541 | 26 | 544 | pectinesterase like protein [Arabidopsis thaliana] |
| EMBL | CBI18560.1 | 0 | 6 | 540 | 3 | 534 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_569041.1 | 0 | 23 | 541 | 28 | 546 | sks17 (SKU5 Similar 17); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002270831.1 | 0 | 6 | 540 | 4 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 32 | 506 | 4 | 516 | A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase Est2 From Alicyclobacillus Acidocaldarius |
| PDB | 1asq_A | 0 | 32 | 506 | 4 | 516 | A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase Est2 From Alicyclobacillus Acidocaldarius |
| PDB | 1asp_B | 0 | 32 | 506 | 4 | 516 | A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase Est2 From Alicyclobacillus Acidocaldarius |
| PDB | 1asp_A | 0 | 32 | 506 | 4 | 516 | A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase Est2 From Alicyclobacillus Acidocaldarius |
| PDB | 1aso_B | 0 | 32 | 506 | 4 | 516 | A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase Est2 From Alicyclobacillus Acidocaldarius |
