| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra037199 |
| Family | GT28 |
| Protein Properties | Length: 470 Molecular Weight: 53174.2 Isoelectric Point: 9.3563 |
| Chromosome | Chromosome/Scaffold: 09 Start: 3994707 End: 3997771 |
| Description | monogalactosyldiacylglycerol synthase type C |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT28 | 284 | 442 | 1.7e-32 |
| VLLMGGGEGMGPVQKTAQALGDSLYDSKQRKPIGQLIVICGRNNTLASALASHEWKIPIKVRGFETQMEKWMGACDCIITKAGPGTIAEALICGLPIILN DYIPGQEKGNVPYVVDNGAGIFTRSPKETAKTVAGWFSSKKNELYKMSENALKLAQPEA | |||
| Full Sequence |
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| Protein Sequence Length: 470 Download |
| MMKVASPRAQ DDSITQKVFR RVYSNFSFST VDDDYNHNRR RRSRSGDYGK ESLSKRGFEE 60 KEQVMEMEQM GAERIKTVLI LMSDTGGGHR ASAEAIRDAF NIEFGDDYRI IIKDVWKEYT 120 GWPLNDMERQ YKFMVKHVGL WSVAFHGTSP KWIHRSYLSA LAAYYAKQIE AGLMEYKPDI 180 IISVHPLMQH IPLWVMKRQG LQKKVIFVTV ITDLNTCHRT WFHHGVSRCY CPSKEVAKRA 240 LVDGLGDSQI RVFGLPVRPS FPRTIIGKDD LRKELEIDSN LPAVLLMGGG EGMGPVQKTA 300 QALGDSLYDS KQRKPIGQLI VICGRNNTLA SALASHEWKI PIKVRGFETQ MEKWMGACDC 360 IITKAGPGTI AEALICGLPI ILNDYIPGQE KGNVPYVVDN GAGIFTRSPK ETAKTVAGWF 420 SSKKNELYKM SENALKLAQP EAVFDIVKDI HHLSQQQQKR IQLYNDYSY* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0707 | MurG | 2.0e-26 | 79 | 448 | 391 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK13608 | PRK13608 | 7.0e-29 | 173 | 464 | 301 | + diacylglycerol glucosyltransferase; Provisional | ||
| PRK13609 | PRK13609 | 4.0e-43 | 74 | 462 | 395 | + diacylglycerol glucosyltransferase; Provisional | ||
| pfam06925 | MGDG_synth | 1.0e-67 | 89 | 257 | 169 | + Monogalactosyldiacylglycerol (MGDG) synthase. This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. | ||
| PLN02605 | PLN02605 | 0 | 78 | 457 | 382 | + monogalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009247 | glycolipid biosynthetic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030246 | carbohydrate binding |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001118301.1 | 0 | 1 | 364 | 1 | 361 | MGDC; 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_565352.1 | 0 | 1 | 469 | 1 | 465 | MGDC; 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] |
| RefSeq | XP_002324614.1 | 0 | 65 | 455 | 64 | 454 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331019.1 | 0 | 65 | 457 | 1 | 393 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530758.1 | 0 | 1 | 457 | 2 | 452 | 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2u_A | 0.01 | 260 | 447 | 144 | 348 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | 2.4.1.46-RXN | EC-2.4.1.46 | monogalactosyldiacylglycerol synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO466477 | 384 | 76 | 459 | 0 |
| GO845052 | 296 | 173 | 468 | 0 |
| EX529759 | 308 | 128 | 435 | 0 |
| DT339279 | 296 | 136 | 431 | 0 |
| HO604323 | 389 | 76 | 453 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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