| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra037213 |
| Family | GT48 |
| Protein Properties | Length: 1911 Molecular Weight: 219106 Isoelectric Point: 9.2248 |
| Chromosome | Chromosome/Scaffold: 09 Start: 3897421 End: 3907670 |
| Description | callose synthase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 1027 | 1770 | 0 |
| VPINLEARRRIAFFSNSLFMDMPRAPRVRNMLSFSVLTPYYSEETVYSKNDLEMENEDGISVVYYLQKIFPDEWTNFLERLGCKDETAVLESDENILQLR HWVSLRGQTLFRTVRGMMYYRRALKLQAFLDMATEKEILEGYKAISEPTEEDKKSQRSLYAQLEAVADLKFTYVATCQNYGNQKRSGDRRATDILNLMVN NPSLRVAYIDEVEEREGGKVHKVFYSVLIKAVENLDQEIYRVKLPGPAKIGEGKPENQNHALIFTRGEALQAIDMNQDHYLEEALKMRNLLEEFNEDHGV RAPTILGFREHIFTGSVSSLAWFMSNQETSFVTIGQRVLASPLKVRFHYGHPDVFDRIFHITRGGISKASRGINLSEDIFAGFNSTLRRGNITHHEYIQV GKGRDVGLNQISLFEAKVACGNGEQTLSRDLYRLGHRFDFFRMMSCYFTTVGFYISSMIVVLTVYAFLYGRLYLSLSGVEEAIVKYAAAKGDSSLKAAMA SQSVVQLGMLMTLPMIMEIGLERGFRTALCDLIIMQLQLAPVFFTFSLGTKVHYYGRTILHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGMELMV LLICYRLYGKATEDSVAYMLVLGSTWFLVASWLFSPFLFNPSGFEWQKIVDDWDDWNKWISSRGGIGVPAVKSWESWWEEEQEHLLHSGFFGKFWEIFLS LRYFIYQYGIVYHLNLTKESRLGKQQSLIVYGLSWLVIVAVMIV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1911 Download |
| MAQSSTSHDS GPQGLMRRPS RSAATTMSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR 60 VAYLCRFYAF EKAHRLDPSS SGRGVRQFKT LLFQRLERDN ASSLASRVKK TDGREVESYY 120 QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ 180 EKNEIYAPYN ILPLDSAGAS QSVMQLEEVK AAVAALGNTR GLNWPSGFEQ HKKKSGNLDL 240 LDWNQREHLV CLLADNHIRL TPRPEPLNKL DDRAVDAVKT KLFKNYKNWC KFLGRKHSLR 300 LPQGAEDIQQ RKILYMGLYL LIWGEAANIR FMPECLCYIF HNMAYELHGL LAGNVSIVTG 360 ENIKPSYGGD DEAFLRKVIT PIYRVVEKEA SKSANGKAAH SDWSNYDDLN EYFWSPDCFS 420 LGWPMRDDGD FFKSTRDMAQ GKKGSLRKAG NTGKSNFTET RTFWHIYHSF DRLWTFYLLA 480 LQAMIILAFK RVELREILNK DVLYSLSSIF ITAAFLRLLQ SLLDVILNFP GFHRWKFTEI 540 LRNILKIVVS LAWCVVLPLC YAQSVSFAPG MLKQWLSFLP RVKGVPPLYI LAVALYLLPN 600 VLAAIMFSFP MLRRWIENSD WHIIRLLLWW SQPRIYVGRG MHESQISLIK YTIFWLLLFC 660 CKFAFSYFLQ VKLLVKPTNA IMSIRHVKYK WHEFFPDAEH NYGAVVSLWL PVILVYFMDT 720 QIWYAIFSTI CGGVIGAFDR LGEIRTLGML RSRFQSLPGA FNTYLVPSDK TRRRGFSLSK 780 RFAEVTAARR TEAAKFSQLW NEIISSFREE DLISDREMDL LLVPYTSDPS LKLIQWPPFL 840 LASKIPIALD MAAQFRTKDS DLWKRICADE YMKCAVIECY ESFKHVLHTL VIGENEKRII 900 GIIIKEVESN ISKNSFLSNF RMAPLPALCS KFVELVGILK DADPSKRDTV VLLLQDMLEV 960 TTRDMMQNEN RELVELGHTN KESGRQLFAG TDAKPAILFP PVATAQWDEQ IRRLHLLLTV 1020 KESAMDVPIN LEARRRIAFF SNSLFMDMPR APRVRNMLSF SVLTPYYSEE TVYSKNDLEM 1080 ENEDGISVVY YLQKIFPDEW TNFLERLGCK DETAVLESDE NILQLRHWVS LRGQTLFRTV 1140 RGMMYYRRAL KLQAFLDMAT EKEILEGYKA ISEPTEEDKK SQRSLYAQLE AVADLKFTYV 1200 ATCQNYGNQK RSGDRRATDI LNLMVNNPSL RVAYIDEVEE REGGKVHKVF YSVLIKAVEN 1260 LDQEIYRVKL PGPAKIGEGK PENQNHALIF TRGEALQAID MNQDHYLEEA LKMRNLLEEF 1320 NEDHGVRAPT ILGFREHIFT GSVSSLAWFM SNQETSFVTI GQRVLASPLK VRFHYGHPDV 1380 FDRIFHITRG GISKASRGIN LSEDIFAGFN STLRRGNITH HEYIQVGKGR DVGLNQISLF 1440 EAKVACGNGE QTLSRDLYRL GHRFDFFRMM SCYFTTVGFY ISSMIVVLTV YAFLYGRLYL 1500 SLSGVEEAIV KYAAAKGDSS LKAAMASQSV VQLGMLMTLP MIMEIGLERG FRTALCDLII 1560 MQLQLAPVFF TFSLGTKVHY YGRTILHGGA KYRATGRGFV VRHEKFAENY RMYSRSHFVK 1620 GMELMVLLIC YRLYGKATED SVAYMLVLGS TWFLVASWLF SPFLFNPSGF EWQKIVDDWD 1680 DWNKWISSRG GIGVPAVKSW ESWWEEEQEH LLHSGFFGKF WEIFLSLRYF IYQYGIVYHL 1740 NLTKESRLGK QQSLIVYGLS WLVIVAVMIV LKIVSMGRKK FSADFQLMFR LLKLFLFIGS 1800 VVIVGMLFHF LKLTVGDILQ SFLAFLPTGW ALLQISQVGR TLMKAVGMWG SVKALARGYE 1860 YIMGVVIFMP VTILAWFPFV SEFQTRLLFN QAFSRGLQIQ RILAGGKKQK * 1920 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 4.0e-10 | 43 | 156 | 117 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 1.0e-56 | 310 | 426 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1027 | 1771 | 831 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK49452.2 | 0 | 3 | 1910 | 14 | 1931 | AF304372_1 putative beta-1,3-glucan synthase [Nicotiana alata] |
| GenBank | ACV04900.1 | 0 | 1 | 1910 | 1 | 1923 | callose synthase 5 [Arabidopsis thaliana] |
| EMBL | CAN80181.1 | 0 | 14 | 1910 | 2 | 1933 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_849953.2 | 0 | 1 | 1910 | 1 | 1923 | CALS5 (CALLOSE SYNTHASE 5); 1,3-beta-glucan synthase [Arabidopsis thaliana] |
| RefSeq | XP_002274337.1 | 0 | 6 | 1910 | 2 | 1918 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
