| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra037510 |
| Family | AA1 |
| Protein Properties | Length: 566 Molecular Weight: 63694.8 Isoelectric Point: 8.8706 |
| Chromosome | Chromosome/Scaffold: 06 Start: 21125710 End: 21128203 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 19 | 551 | 0 |
| CIAHRYTFTVKEVPYNKLCSTKKILTVNSQFPGPVLKVYKGDTIYVNVRNRASENITMHWHGVEQPGNPWSDGPEYITQCPIRPGSDFMYEVIFSIEDAT VWWHAHSSWTRATVHGLIFIYPRPGTFLPFPKPDHEIPLVLGEWWKEDVREVVEQFIRTGADPNVSDALTINGHPGFLYPCSNSDTFELTVEKGKTYRIR MVNAAMNLIFFFSIAKHSLTVVAADGHYTKPLNATYITISPGQTLDVLLHADQNPKRTYYMAARAYHSSPVIRFNNSTTIGILRYISSSNAKTSSYPSLP NYNDTSAAFGFFTNIKSLYSGQVRVKISRRIISTVSLNLLACPNNSCQGPNGLRSVAEVEAASMNNISFVTPNHVDILKAYYLHIKGVYGTRFPAFPPLV FNFTADDQPLILQTSRLATEVKMIKYGEAVETVFQGTSLGGGGIDHPMHLHGFSFYIVGFGFGNYNVTKDPSSNYNLKDPPYRNTATVPRNGWIAIRFIA NNPGVWFMHCHFDRHLTWGMNVVFIVENGRGIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MPHSFSHFFL ISLFLYTKCI AHRYTFTVKE VPYNKLCSTK KILTVNSQFP GPVLKVYKGD 60 TIYVNVRNRA SENITMHWHG VEQPGNPWSD GPEYITQCPI RPGSDFMYEV IFSIEDATVW 120 WHAHSSWTRA TVHGLIFIYP RPGTFLPFPK PDHEIPLVLG EWWKEDVREV VEQFIRTGAD 180 PNVSDALTIN GHPGFLYPCS NSDTFELTVE KGKTYRIRMV NAAMNLIFFF SIAKHSLTVV 240 AADGHYTKPL NATYITISPG QTLDVLLHAD QNPKRTYYMA ARAYHSSPVI RFNNSTTIGI 300 LRYISSSNAK TSSYPSLPNY NDTSAAFGFF TNIKSLYSGQ VRVKISRRII STVSLNLLAC 360 PNNSCQGPNG LRSVAEVEAA SMNNISFVTP NHVDILKAYY LHIKGVYGTR FPAFPPLVFN 420 FTADDQPLIL QTSRLATEVK MIKYGEAVET VFQGTSLGGG GIDHPMHLHG FSFYIVGFGF 480 GNYNVTKDPS SNYNLKDPPY RNTATVPRNG WIAIRFIANN PGVWFMHCHF DRHLTWGMNV 540 VFIVENGRGI NQQMLPPPPD LPPCY* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 2.0e-55 | 33 | 546 | 562 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 2.0e-69 | 24 | 543 | 556 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-70 | 23 | 542 | 553 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 9.0e-86 | 23 | 542 | 559 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 19 | 564 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB11074.1 | 0 | 76 | 565 | 1 | 489 | laccase (diphenol oxidase) [Arabidopsis thaliana] |
| RefSeq | NP_199621.2 | 0 | 1 | 565 | 1 | 564 | TT10 (TRANSPARENT TESTA 10); copper ion binding / laccase [Arabidopsis thaliana] |
| RefSeq | XP_002264394.1 | 0 | 8 | 564 | 15 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264702.1 | 0 | 8 | 564 | 11 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307538.1 | 0 | 11 | 547 | 15 | 550 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 24 | 542 | 6 | 521 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1asq_A | 0 | 24 | 542 | 6 | 521 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1asp_B | 0 | 24 | 542 | 6 | 521 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1asp_A | 0 | 24 | 542 | 6 | 521 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 1aso_B | 0 | 24 | 542 | 6 | 521 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
