| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra037647 |
| Family | GH1 |
| Protein Properties | Length: 804 Molecular Weight: 93577 Isoelectric Point: 6.4096 |
| Chromosome | Chromosome/Scaffold: 04 Start: 18339584 End: 18346900 |
| Description | beta glucosidase 27 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 102 | 466 | 0 |
| ITPLATLFHWDTPQALEEEYGGFLSENITMDFRDFANICFEEFGDRVKLWLTINEPWVYSVGGYDAGRKAPGRASKYMNDAATAGKSGHEAYIVSHNLLL SHAEAVEAFRNCHNCKDGKIGMAHCPLWYEPYDVTCDEDVEAAERAMEFMFGWHMNPTVHGDYPEVMKKIVGKRLPSFTESQSRKLKGSFDFIGINYYSS VYAKNVDEVDPDKPFWRSDQHVEWKKQNKAGKAIGAQGGVEWNLMYPQGLRKVLNYAKNKYGNPKFIITENGHCDAYEEKKPKLYELMDMKRTDYHKKHI SNVHQAIYEDGVQVDGYFAWSLLDNCEWNCGYEIRYGLFYVDYENGLKRYPKMSAMWFKEFLKEK | |||
| Full Sequence |
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| Protein Sequence Length: 804 Download |
| MTQGKRSFDK KKSFGRADFP QGFLFGTASS AYQYEGAVKE GSRGESIWDT FARKYPERNC 60 HSNADETIDF YHRYKEDIQR MKDINMDSFR FSISWVRILP RITPLATLFH WDTPQALEEE 120 YGGFLSENIT MDFRDFANIC FEEFGDRVKL WLTINEPWVY SVGGYDAGRK APGRASKYMN 180 DAATAGKSGH EAYIVSHNLL LSHAEAVEAF RNCHNCKDGK IGMAHCPLWY EPYDVTCDED 240 VEAAERAMEF MFGWHMNPTV HGDYPEVMKK IVGKRLPSFT ESQSRKLKGS FDFIGINYYS 300 SVYAKNVDEV DPDKPFWRSD QHVEWKKQNK AGKAIGAQGG VEWNLMYPQG LRKVLNYAKN 360 KYGNPKFIIT ENGHCDAYEE KKPKLYELMD MKRTDYHKKH ISNVHQAIYE DGVQVDGYFA 420 WSLLDNCEWN CGYEIRYGLF YVDYENGLKR YPKMSAMWFK EFLKEKDDDK IKKPQVKRMP 480 RRPSGGRRFI KHQPLAFSPF MRSLALASRR KLHRHQQEDD SPRSEELMSF DQKLPTLSKK 540 EQKEQLSDSS DEEDSQGDVQ ADFEFFDPKP TDFNGVKILL KNYLDDKEWD LSSFVDLVLE 600 QTTVGTVVKV ADDEDESVFA VVSALNLARY KEHKCFRELK EFLLQVCSEK SVAKDLGVML 660 EKKAHDVGIL VSQRVMNLPP QLLPPLYDGL FDEVSWATED EPTEELRGSF RFKWYLLVTK 720 IYKLKNPKQR KPRRGEEEEE ETVFLKPEDE LFLQLSSWSF TYPMRSQLVT SHEMKNYQLM 780 GLVMAVEAKR IPEFRQMLNS LID* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 2.0e-105 | 14 | 458 | 478 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 3.0e-110 | 13 | 458 | 476 | + beta-glucosidase | ||
| COG2723 | BglB | 8.0e-116 | 19 | 458 | 475 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 2.0e-125 | 20 | 458 | 475 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 5.0e-150 | 19 | 458 | 468 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG23719.1 | 0 | 16 | 501 | 28 | 541 | beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CAB75927.1 | 0 | 8 | 464 | 2 | 484 | beta-glucosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_181977.1 | 0 | 1 | 478 | 1 | 509 | PEN2 (PENETRATION 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| RefSeq | NP_191571.4 | 0 | 1 | 464 | 1 | 490 | BGLU27 (BETA GLUCOSIDASE 27); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_191573.1 | 0 | 16 | 501 | 28 | 541 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1cbg_A | 0 | 7 | 465 | 7 | 490 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
| PDB | 3ptq_B | 0 | 16 | 463 | 31 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
| PDB | 3ptq_A | 0 | 16 | 463 | 31 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
| PDB | 3ptm_B | 0 | 16 | 463 | 31 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
| PDB | 3ptm_A | 0 | 16 | 463 | 31 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX117664 | 269 | 478 | 746 | 0 |
| EX136904 | 270 | 478 | 747 | 0 |
| EW737429 | 244 | 561 | 804 | 0 |
| EX137835 | 245 | 487 | 731 | 0 |
| DK502006 | 251 | 478 | 728 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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