y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra037754 |
Family | GH31 |
Protein Properties | Length: 842 Molecular Weight: 95300.2 Isoelectric Point: 5.3202 |
Chromosome | Chromosome/Scaffold: 09 Start: 3408808 End: 3411984 |
Description | Glycosyl hydrolases family 31 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH31 | 324 | 720 | 0 |
FFFVGPEPKDVVRQYASVTGTSAMPQLFATGYHQCRWNYKDEEDVAQVDSKFDEYDIPYDVLWLDIEHTDGKRYFTWDSALFPNPEEMQKKLDVKGRRMV TIVDPHIKRDDSYFLHKEATEMGYYVKDSSGKDFDGWCWPGSSSYIDMLSPEIREWWGGRFSYKNYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHVG GVEHREVHNAYGYYFHMATSDGLVMRGEGKDRPFVLSRAIFPGTQRYGAIWTGDNTAEWEHLRVSIPMLLTLGLTGITFSGADIGGFFGNPEPELLVRWY QVGAYYPFFRGHAHHDTKRREPWLFGERNTELMRDAIHTRYTLLPYFYTLFREANVTGVPVLRPLWMEFPQDEATFSNDEAFMVGNGLLVQGVYTKV |
Full Sequence |
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Protein Sequence Length: 842 Download |
MRSLLFTLSL LCFASQTSLS WKKEEFRTCD QTPFCKRARS RAPGTCSLIA TDVTISDGDL 60 VAKLTPKDND DHINPLILSL SVYRNGIVRL RIDEDHSLNP PKKRFRVPDV VVSELEAKKI 120 RLEKFATEND PPSSVVHVGD GYEAVVRHEP FEVYVRERSG DRRRVVSLNS HGLFDFEQLG 180 KKGEGDNWEE KFRTHTDSRP FGSQSISFDV SFYDSSFVYG IPEHATSFAL KPTKGPGVEE 240 SAEPYRLFNL DVFEYDHESP FGLYGSIPFM VSHGGTGKSS GFFWLNAAEM QIDVLAEGWD 300 AESGGGDSRI NTLWMSEAGI VDTFFFVGPE PKDVVRQYAS VTGTSAMPQL FATGYHQCRW 360 NYKDEEDVAQ VDSKFDEYDI PYDVLWLDIE HTDGKRYFTW DSALFPNPEE MQKKLDVKGR 420 RMVTIVDPHI KRDDSYFLHK EATEMGYYVK DSSGKDFDGW CWPGSSSYID MLSPEIREWW 480 GGRFSYKNYV GSTPSLYIWN DMNEPSVFNG PEVTMPRDAL HVGGVEHREV HNAYGYYFHM 540 ATSDGLVMRG EGKDRPFVLS RAIFPGTQRY GAIWTGDNTA EWEHLRVSIP MLLTLGLTGI 600 TFSGADIGGF FGNPEPELLV RWYQVGAYYP FFRGHAHHDT KRREPWLFGE RNTELMRDAI 660 HTRYTLLPYF YTLFREANVT GVPVLRPLWM EFPQDEATFS NDEAFMVGNG LLVQGVYTKV 720 VALNSSQEAD GELYIDDGKS FEFKRGAYIH RRFVFSNGVL TSTNIAPPEA SLSSQCLIDR 780 IILLGHSSGP NSALVEPLNQ KAEIEMGPLR MGGLVASSGT RVLTIRKPGV RVDQDWTIKI 840 L* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1501 | COG1501 | 2.0e-153 | 188 | 713 | 530 | + Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | ||
cd06604 | GH31_glucosidase_II_MalA | 2.0e-156 | 343 | 681 | 348 | + Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source. | ||
cd06603 | GH31_GANC_GANAB_alpha | 0 | 343 | 681 | 339 | + This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. | ||
pfam01055 | Glyco_hydro_31 | 0 | 324 | 719 | 397 | + Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201189.1 | 0 | 1 | 719 | 1 | 730 | RSW3 (RADIAL SWELLING 3); glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_201189.1 | 0 | 717 | 841 | 797 | 921 | RSW3 (RADIAL SWELLING 3); glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002268690.1 | 0 | 20 | 747 | 27 | 764 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270200.1 | 0 | 20 | 747 | 27 | 764 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270200.1 | 8e-36 | 717 | 841 | 803 | 926 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3w38_A | 0 | 218 | 716 | 207 | 706 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3w37_A | 0 | 218 | 716 | 207 | 706 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2g3n_F | 0 | 245 | 719 | 81 | 564 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2g3n_E | 0 | 245 | 719 | 81 | 564 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2g3n_D | 0 | 245 | 719 | 81 | 564 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-2141 | EC-3.2.1.20 | α-glucosidase |