| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra037859 |
| Family | AA2 |
| Protein Properties | Length: 356 Molecular Weight: 38930.7 Isoelectric Point: 7.2655 |
| Chromosome | Chromosome/Scaffold: 09 Start: 10494410 End: 10496733 |
| Description | stromal ascorbate peroxidase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 102 | 344 | 0 |
| TKFCHPILVRLGWHDAGTYNKNISEWPQRGGANGSLRYEIELKHAANAGLVNALNLIKHIKDMYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDTSG PHECPEEGRLPDAGPPSPANHLREVFYRMGLDDKDIVALSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFTEIKEKRDEDLLV LPTDAAIFEDPSFKVYAEKYAADQDAFFKDYAESHAKLSNLGA | |||
| Full Sequence |
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| Protein Sequence Length: 356 Download |
| MAERVSLALN TTTTTMASSL RTQVSASRLL RFSSSGSKLS FPSSSLSFTR SLVSSPLLSQ 60 KRCQAALVNR SFSSAATTHC TAATDPEQLK SAREDIKELL NTKFCHPILV RLGWHDAGTY 120 NKNISEWPQR GGANGSLRYE IELKHAANAG LVNALNLIKH IKDMYSGISY ADLFQLASAT 180 AIEEAGGPKI PMKYGRVDTS GPHECPEEGR LPDAGPPSPA NHLREVFYRM GLDDKDIVAL 240 SGAHTLGRSR PERSGWGKPE TKYTKEGPGA PGGQSWTPEW LKFDNSYFTE IKEKRDEDLL 300 VLPTDAAIFE DPSFKVYAEK YAADQDAFFK DYAESHAKLS NLGAKFNPPE GTCDF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 2.0e-40 | 92 | 324 | 241 | + Peroxidase. | ||
| PLN02364 | PLN02364 | 2.0e-58 | 89 | 343 | 256 | + L-ascorbate peroxidase 1 | ||
| PLN02879 | PLN02879 | 3.0e-62 | 89 | 343 | 255 | + L-ascorbate peroxidase | ||
| PLN02608 | PLN02608 | 5.0e-92 | 85 | 349 | 270 | + L-ascorbate peroxidase | ||
| cd00691 | ascorbate_peroxidase | 9.0e-132 | 85 | 347 | 267 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11732.1 | 0 | 55 | 350 | 81 | 377 | stromal ascorbate peroxidase [Gossypium hirsutum] |
| DDBJ | BAD14932.1 | 0 | 1 | 353 | 1 | 350 | stromal ascorbate peroxidase [Brassica oleracea] |
| EMBL | CAA67425.1 | 0 | 60 | 353 | 78 | 371 | stromal ascorbate peroxidase [Arabidopsis thaliana] |
| RefSeq | NP_001078356.1 | 0 | 61 | 353 | 54 | 346 | SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase [Arabidopsis thaliana] |
| RefSeq | NP_192579.1 | 0 | 60 | 353 | 78 | 371 | SAPX (STROMAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1iyn_A | 0 | 82 | 351 | 1 | 270 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 2xj6_A | 0 | 89 | 343 | 15 | 245 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 2xih_A | 0 | 89 | 343 | 15 | 245 | A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability |
| PDB | 2xif_A | 0 | 89 | 343 | 15 | 245 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| PDB | 2xi6_A | 0 | 89 | 343 | 15 | 245 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX075987 | 280 | 57 | 336 | 0 |
| EG020425 | 316 | 10 | 325 | 0 |
| EX262979 | 269 | 85 | 353 | 0 |
| HO779395 | 297 | 57 | 353 | 0 |
| ES912296 | 280 | 17 | 296 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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