| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra038001 |
| Family | AA1 |
| Protein Properties | Length: 556 Molecular Weight: 62272.8 Isoelectric Point: 9.0074 |
| Chromosome | Chromosome/Scaffold: 06 Start: 181413 End: 183837 |
| Description | SKU5 similar 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 45 | 505 | 0 |
| VPQQVILINGQCPGPNLNSTSNNNIIVNVFNNLDEPFLLTWNGIQHRKNSWQAGTAGTMCPIPPGTNFTYHFQPKDQIGSYFYYPTTAMHRAAGAFGGLR VNSRLLIPVPYADPEDDYTVLINDWYTKSHTQLKNFLDSGRTIGRPDGILINGKAGKGDGSDQPLFTLKQGKTYRIRICNVGLKASLNFRIQNLKMKLVE MEGSHVLQNDYDSLDVHVGQCFGVILTANQEPKDYYIVASTRFLKNALTTTGLLRYEGGKGLASSQLPAAPVGWAWSLNQFRSFRWNLTASAARPNPQGS YHYGKINITRTIKLVNTQGKVDSKLRYALNGVSHIDTETPLKLAEYFGVTDKVFKYDSISDNPTSDQIKNIKIEPNVLNITHRNFIEVVFENHERSVQSW HLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTIQVYPKCWAAILLTFDNCGMWNIRSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 556 Download |
| MKGGVKLWAV CLCLALTTVV IVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQCPGPN 60 LNSTSNNNII VNVFNNLDEP FLLTWNGIQH RKNSWQAGTA GTMCPIPPGT NFTYHFQPKD 120 QIGSYFYYPT TAMHRAAGAF GGLRVNSRLL IPVPYADPED DYTVLINDWY TKSHTQLKNF 180 LDSGRTIGRP DGILINGKAG KGDGSDQPLF TLKQGKTYRI RICNVGLKAS LNFRIQNLKM 240 KLVEMEGSHV LQNDYDSLDV HVGQCFGVIL TANQEPKDYY IVASTRFLKN ALTTTGLLRY 300 EGGKGLASSQ LPAAPVGWAW SLNQFRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN 360 TQGKVDSKLR YALNGVSHID TETPLKLAEY FGVTDKVFKY DSISDNPTSD QIKNIKIEPN 420 VLNITHRNFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTI 480 QVYPKCWAAI LLTFDNCGMW NIRSENSERR YLGQQLYASV LSPEKSLRDE YNMPESSLQC 540 GLVKDKPKIN PYAGA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 2 | 554 | 553 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 16 | 541 | 527 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 19 | 541 | 523 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 12 | 551 | 545 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 10 | 544 | 547 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA47177.1 | 0 | 25 | 555 | 24 | 555 | Bplo [Brassica napus] |
| EMBL | CAA47178.1 | 0 | 25 | 555 | 24 | 555 | Bplo [Brassica napus] |
| RefSeq | NP_175953.1 | 0 | 1 | 555 | 1 | 555 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_187947.1 | 0 | 25 | 555 | 24 | 554 | sks11 (SKU5 Similar 11); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Swiss-Prot | Q00624 | 0 | 25 | 555 | 24 | 555 | ASOL_BRANA RecName: Full=L-ascorbate oxidase homolog; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 30 | 541 | 5 | 539 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 1asq_A | 0 | 30 | 541 | 5 | 539 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 1asp_B | 0 | 30 | 541 | 5 | 539 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 1asp_A | 0 | 30 | 541 | 5 | 539 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
| PDB | 1aso_B | 0 | 30 | 541 | 5 | 539 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
