| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra038088 |
| Family | GH14 |
| Protein Properties | Length: 499 Molecular Weight: 56177.5 Isoelectric Point: 5.0118 |
| Chromosome | Chromosome/Scaffold: 08 Start: 6620480 End: 6622918 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 17 | 437 | 0 |
| YVMLPLGVVNVENVFADPETLETHLKRLKEEAGIDGVMVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDVVTIPIPKWVRE VGESDPDIYYTNRRGTRDIEYLSLGVDNLPLFAGRTPVQMYSDYMSSFKENMLELLEAGAIVDIEVGLGPAGELRYPAYPQSQGWVFPGIGEFQCYDKYS KSEFKEAAAKAGHPEWDLPDNAGEYNDKAEETGFFKTNGTYVSEEGKFFLTWYSNKLIFHGDQIIGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELT AGYYNLYERDGYRPIARMLSKHYGTLNFTCLEMKDTDNTAEALSAPQELVQMVLSKAWKEGIEVAGENALETYGTKGYNQILLNARPNGVNHNGKPKLRM YGFTYLRLSDTVFQENNFELF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 499 Download |
| MAANYNEKLL LNYVPVYVML PLGVVNVENV FADPETLETH LKRLKEEAGI DGVMVDVWWG 60 IIESKGPKQY DWTAYKTLFQ LIARLGLKIQ AIMSFHQCGG NVGDVVTIPI PKWVREVGES 120 DPDIYYTNRR GTRDIEYLSL GVDNLPLFAG RTPVQMYSDY MSSFKENMLE LLEAGAIVDI 180 EVGLGPAGEL RYPAYPQSQG WVFPGIGEFQ CYDKYSKSEF KEAAAKAGHP EWDLPDNAGE 240 YNDKAEETGF FKTNGTYVSE EGKFFLTWYS NKLIFHGDQI IGEANKIFAG LKVNLAAKVS 300 GIHWLYNHHS HAAELTAGYY NLYERDGYRP IARMLSKHYG TLNFTCLEMK DTDNTAEALS 360 APQELVQMVL SKAWKEGIEV AGENALETYG TKGYNQILLN ARPNGVNHNG KPKLRMYGFT 420 YLRLSDTVFQ ENNFELFKKF VRKMHADQDY SGDAEKYGHE IVPLKTPNSH LTVEDIADAA 480 QPSGAFKWDT ETDMKVDG* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 4.0e-123 | 13 | 447 | 439 | + beta-amylase | ||
| PLN00197 | PLN00197 | 1.0e-154 | 14 | 464 | 462 | + beta-amylase; Provisional | ||
| PLN02905 | PLN02905 | 3.0e-156 | 13 | 447 | 439 | + beta-amylase | ||
| PLN02803 | PLN02803 | 7.0e-171 | 14 | 444 | 434 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 498 | 498 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA07842.1 | 0 | 1 | 498 | 1 | 498 | beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAH20736.1 | 0 | 1 | 498 | 1 | 498 | beta-amylase [Raphanus sativus] |
| EMBL | CAB10300.1 | 0 | 1 | 498 | 1 | 499 | beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_567460.1 | 0 | 1 | 498 | 1 | 498 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_849389.1 | 0 | 1 | 410 | 1 | 410 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
| PDB | 1q6c_A | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1uko_D | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 496 | 5 | 499 | 0 |
| HO803971 | 399 | 93 | 491 | 0 |
| EG522849 | 266 | 228 | 493 | 0 |
| EE565622 | 256 | 81 | 336 | 0 |
| EV022257 | 239 | 261 | 499 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
