| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra038094 |
| Family | GH1 |
| Protein Properties | Length: 431 Molecular Weight: 49452.1 Isoelectric Point: 7.8437 |
| Chromosome | Chromosome/Scaffold: 08 Start: 6578371 End: 6580661 |
| Description | thioglucoside glucohydrolase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 16 | 406 | 0 |
| RGVNQEGVNYYRGLINRLVEKGITPFVTLFHWDLPQALQDEYEGFLDPQIINDFKDYADLCFQEFGANVTNWITINQLYTVPTRGYGFGSDAPGRCSRAL DPTCYAGNSSTEPYIVAHHQLLAHATVVDLYRKNYKHQGGKIGPVMITRWFLPYDNNDPESKAATERMKEFFLGWFMGPLTNGAYPQIMIDTVGKRLPSF TPEESKLVKGSYDFLGLNYYVTQYVQPSPNHVDWANHTAMMDAGVTLTYRDINGHAIGPLFTEDKVDAAKNTYYYPEGISYVMDYFKTKYYNPLIYVTEN GFSTPGDEPREAAKLDCKRIDYLCSHLYFLSKVIKENHVNVKGYFAWSLGDNYEFCKGFTVRFGLSYIDWNNITDRDLKQSGKWYKKFIIT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 431 Download |
| MLLATDFPLR GGKRSRGVNQ EGVNYYRGLI NRLVEKGITP FVTLFHWDLP QALQDEYEGF 60 LDPQIINDFK DYADLCFQEF GANVTNWITI NQLYTVPTRG YGFGSDAPGR CSRALDPTCY 120 AGNSSTEPYI VAHHQLLAHA TVVDLYRKNY KHQGGKIGPV MITRWFLPYD NNDPESKAAT 180 ERMKEFFLGW FMGPLTNGAY PQIMIDTVGK RLPSFTPEES KLVKGSYDFL GLNYYVTQYV 240 QPSPNHVDWA NHTAMMDAGV TLTYRDINGH AIGPLFTEDK VDAAKNTYYY PEGISYVMDY 300 FKTKYYNPLI YVTENGFSTP GDEPREAAKL DCKRIDYLCS HLYFLSKVIK ENHVNVKGYF 360 AWSLGDNYEF CKGFTVRFGL SYIDWNNITD RDLKQSGKWY KKFIITKDLP KKDFLRSSLT 420 FEKKKKFADA * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 2.0e-80 | 18 | 404 | 388 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 1.0e-82 | 16 | 413 | 404 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 4.0e-86 | 18 | 430 | 423 | + beta-glucosidase | ||
| TIGR03356 | BGL | 3.0e-88 | 18 | 400 | 387 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-136 | 15 | 407 | 397 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1DWA | 0 | 12 | 404 | 105 | 497 | M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1: Structure Prior To Irradiation |
| PDB | 1MYR | 0 | 12 | 404 | 107 | 499 | A Chain A, Myrosinase From Sinapis Alba |
| DDBJ | BAE16356.1 | 0 | 12 | 430 | 126 | 545 | myrosinase [Eutrema wasabi] |
| EMBL | CAA79989.2 | 0 | 12 | 430 | 125 | 527 | myrosinase, thioglucoside glucohydrolase [Brassica napus] |
| Swiss-Prot | P29736 | 0 | 12 | 404 | 107 | 499 | MYRA_SINAL RecName: Full=Myrosinase MA1; AltName: Full=Sinigrinase; AltName: Full=Thioglucosidase |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1dwj_M | 0 | 12 | 404 | 105 | 497 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 1dwi_M | 0 | 12 | 404 | 105 | 497 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 1dwh_M | 0 | 12 | 404 | 105 | 497 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 1dwg_M | 0 | 12 | 404 | 105 | 497 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 1dwf_M | 0 | 12 | 404 | 105 | 497 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| glucosinolate breakdown | RXN-8134 | EC-3.2.1.147 | thioglucosidase |
| glucosinolate breakdown (via thiocyanate-forming protein) | RXN-12024 | EC-3.2.1.147 | thioglucosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EW733123 | 274 | 133 | 406 | 0 |
| BM986073 | 266 | 15 | 280 | 0 |
| EG524108 | 302 | 121 | 418 | 0 |
| FY453332 | 272 | 73 | 342 | 0 |
| FY439560 | 268 | 55 | 320 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |