| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra038490 |
| Family | GT8 |
| Protein Properties | Length: 489 Molecular Weight: 55981.4 Isoelectric Point: 8.6493 |
| Chromosome | Chromosome/Scaffold: 01 Start: 10907339 End: 10911395 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 71 | 291 | 1.3e-30 |
| YEFYVATRVLIRSLKGHHVNADIVVIASLDVPLNWIHNLEEMDGAKVVRVENLENPYKKQTNFDNRFKLSLNKLYAWSLSNYDRVVMLDADNLFLKNTDE LFQCGSFCAVFINPCIFHTGLFVLQPSMEVFRDMIRELEVKRDNPDGADQGFLVSYFSDLLNQPLFRPPNNRSTVLTGHFRLPLGYQMDASYYYLKLRWN VPCGPNSVITFPGAVWLKPWY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MNLQRAMVFS CWVLSLLIIE TSGYRDQLFQ PLEAENANAM TMVMERGLQT RGPEHKNAYA 60 TMMYMGTPRD YEFYVATRVL IRSLKGHHVN ADIVVIASLD VPLNWIHNLE EMDGAKVVRV 120 ENLENPYKKQ TNFDNRFKLS LNKLYAWSLS NYDRVVMLDA DNLFLKNTDE LFQCGSFCAV 180 FINPCIFHTG LFVLQPSMEV FRDMIRELEV KRDNPDGADQ GFLVSYFSDL LNQPLFRPPN 240 NRSTVLTGHF RLPLGYQMDA SYYYLKLRWN VPCGPNSVIT FPGAVWLKPW YWWSWPVLPL 300 GLSWHHQRRY TISYSAEMPW VLIQAVFYLG IILVTRLTRS SMSKLCHRRS DKNLTAFKMV 360 ALLLILSAYI IPSFIIPQTI HPLMGWSLYL TGSFALSSIP INAFLLPVLH VLTPWLGILG 420 TLLVMAFPSY PDGVVRALSV FGYAFCCAPF LWVSFVKITS HLQILIDKEV LFPRLGESGS 480 SSSLSKLY* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00176 | PLN00176 | 1.0e-5 | 143 | 253 | 148 | + galactinol synthase | ||
| COG5597 | COG5597 | 5.0e-7 | 67 | 229 | 179 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| cd06914 | GT8_GNT1 | 3.0e-7 | 140 | 290 | 166 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
| pfam01501 | Glyco_transf_8 | 4.0e-10 | 70 | 233 | 201 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 3.0e-63 | 57 | 296 | 243 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB10435.1 | 0 | 1 | 488 | 1 | 442 | glucosyltransferase like protein [Arabidopsis thaliana] |
| RefSeq | NP_193393.4 | 0 | 1 | 488 | 1 | 494 | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_565817.2 | 0 | 1 | 488 | 1 | 497 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
| RefSeq | NP_973607.1 | 0 | 110 | 488 | 8 | 389 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
| RefSeq | XP_002269578.1 | 0 | 50 | 487 | 32 | 472 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u2x_B | 0.00000000000003 | 79 | 228 | 22 | 173 | A Chain A, Dienoyl-Coa Isomerase |
| PDB | 3u2x_A | 0.00000000000003 | 79 | 228 | 22 | 173 | A Chain A, Dienoyl-Coa Isomerase |
| PDB | 3u2v_B | 0.00000000000003 | 79 | 228 | 22 | 173 | A Chain A, Dienoyl-Coa Isomerase |
| PDB | 3u2v_A | 0.00000000000003 | 79 | 228 | 22 | 173 | A Chain A, Dienoyl-Coa Isomerase |
| PDB | 3u2u_B | 0.00000000000003 | 79 | 228 | 22 | 173 | A Chain A, Dienoyl-Coa Isomerase |
