| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra038548 |
| Family | GT20 |
| Protein Properties | Length: 865 Molecular Weight: 97843.6 Isoelectric Point: 6.6022 |
| Chromosome | Chromosome/Scaffold: 09 Start: 5233448 End: 5236204 |
| Description | trehalose phosphatase/synthase 11 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 51 | 541 | 0 |
| KPRRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVSPSEQEDVSQYLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPI FHYLLPMTQAQGSLFDRSHWKAYTKVNKIFADKISEVLNPDEDYVWIHDYHLMILPTFLRKRFHRIKLGFFLHSPFPSSEIYRTLPVRDEILKGFLNCDL IGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIEEIKVAEETAEKVKGLRERFKEKIVMLGVDDLDMFKGISLKFWAMG QLLEQNKELRGKVVLVQITNPARSSGKDVQDVETQIHLIADEVNNKFGRPGSGYKPIVFVNGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQ GSPVLDEALGFGAGDVRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTDAMSSAVTMSDKEKNLRHQKHHKYISSHDVAYWSRSYDQDLQR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 865 Download |
| MLPESWKDQL SLVSADDYQI MGNRIPNAVT KLPGLETGDG DGGNGGAWVS KPRRIVVSNQ 60 LPLRAHRDIS SNKWCFEFDN DSLYLQLKDG FPPETEVVYV GSLNADVSPS EQEDVSQYLL 120 EKFQCVPTFL PSDLLNKYYH GFCKHYLWPI FHYLLPMTQA QGSLFDRSHW KAYTKVNKIF 180 ADKISEVLNP DEDYVWIHDY HLMILPTFLR KRFHRIKLGF FLHSPFPSSE IYRTLPVRDE 240 ILKGFLNCDL IGFHTFDYAR HFLSCCSRML GLDYESKRGY IGLEYFGRTV SIKILPVGIH 300 MGQIEEIKVA EETAEKVKGL RERFKEKIVM LGVDDLDMFK GISLKFWAMG QLLEQNKELR 360 GKVVLVQITN PARSSGKDVQ DVETQIHLIA DEVNNKFGRP GSGYKPIVFV NGPVSTLDKV 420 AYYAISECVV VNAVRDGMNL VPYKYTVTRQ GSPVLDEALG FGAGDVRKSV IIVSEFIGCS 480 PSLSGAIRVN PWNIDAVTDA MSSAVTMSDK EKNLRHQKHH KYISSHDVAY WSRSYDQDLQ 540 RACKDHYNKR FWGVGLGLGF RVVALDPNFR KLGVETIVPA YKKTSSRLIL LDYDGTMMDQ 600 DSLDKKPSDD LITLLNRLCG DPNNLVFIVS GRGKDPLSKW FGSCANLGLS AEHGYFTRWN 660 SDSPWETTVL PTDLGWKKIA EPVMSHYTEA TDGSFIEEKE SAMVWHHQEA DPSFGSWQAK 720 ELLDHLESVL TNEPVVVKRG QHIVEVKPQG VSKGKVVEHL IATMRNSKGK RPDFLLCIGD 780 DRSDEDMFDS IVKHQDVSPI AFAEVFACTV GQKPSKAKYY LDDTPMVINM LEWLASASDK 840 SKDGEQQSKF TFQQGHCRNE IIDL* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 1.0e-163 | 51 | 848 | 833 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 840 | 853 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 52 | 541 | 494 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 53 | 837 | 791 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 53 | 540 | 488 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF98176.1 | 0 | 53 | 838 | 57 | 846 | trehalose-6-phosphate synthase [Solanum lycopersicum] |
| RefSeq | NP_179460.1 | 0 | 1 | 860 | 1 | 861 | ATTPS11; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002308438.1 | 0 | 1 | 842 | 1 | 844 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325087.1 | 0 | 12 | 838 | 1 | 822 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533178.1 | 0 | 49 | 838 | 4 | 792 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 135 | 541 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 135 | 541 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 135 | 541 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 135 | 541 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1uqu_B | 0 | 135 | 541 | 73 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 800 | 63 | 857 | 0 |
| HO779327 | 515 | 94 | 608 | 0 |
| HO779327 | 251 | 604 | 853 | 0 |
| HO797286 | 474 | 369 | 841 | 0 |
| HO795511 | 476 | 367 | 841 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
