| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra038755 |
| Family | GH1 |
| Protein Properties | Length: 522 Molecular Weight: 60021 Isoelectric Point: 6.1605 |
| Chromosome | Chromosome/Scaffold: 03 Start: 24255560 End: 24258956 |
| Description | beta-glucosidase 47 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 44 | 508 | 0 |
| FSFPKDFLFGTASSAYQYEGAYLADGKTLSNWDVFTSIPGKIADGSHGKVAVDHYHLYPEDLDLMKDLGVNSYRFSLSWARILLHGRFGDVNMEGIDHYN RMINAILKKGMEPFITLTHYDIPQELELIYGSWLDPQVREDFVHYAEICFRHFGNRVKFWTTFNEPNVQVILGYQKGTYPPSRCSMTFANCTRGGSDIEP LVAAHNIIRSHLAAVNLYQKKFQEDQRGKIGIVMNTIWFEPVSDSLADRLAAERAQAFYLTWFLDPVVFGRYPREMKDILGEDLPKFTKDDLKSSKNGLD FIGINQYTSRYAKDCLHTTCELGQGGSRAEGFVYSNALKDGLPLGEPTGVNWFNVYPQGMEEMLMYATERYRNIPLYVTENGFGENNTGVLLNDYRRVKF MSNYLDALKRAMRKGADVRGYFTWSLLDNFEWISGYTIRFGMYHVDFDTLERTPRLSASWYKNFI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 522 Download |
| MYVSLCPLLF LCLIIITLVS SSASTRWWYD DHLSLREINA QENFSFPKDF LFGTASSAYQ 60 YEGAYLADGK TLSNWDVFTS IPGKIADGSH GKVAVDHYHL YPEDLDLMKD LGVNSYRFSL 120 SWARILLHGR FGDVNMEGID HYNRMINAIL KKGMEPFITL THYDIPQELE LIYGSWLDPQ 180 VREDFVHYAE ICFRHFGNRV KFWTTFNEPN VQVILGYQKG TYPPSRCSMT FANCTRGGSD 240 IEPLVAAHNI IRSHLAAVNL YQKKFQEDQR GKIGIVMNTI WFEPVSDSLA DRLAAERAQA 300 FYLTWFLDPV VFGRYPREMK DILGEDLPKF TKDDLKSSKN GLDFIGINQY TSRYAKDCLH 360 TTCELGQGGS RAEGFVYSNA LKDGLPLGEP TGVNWFNVYP QGMEEMLMYA TERYRNIPLY 420 VTENGFGENN TGVLLNDYRR VKFMSNYLDA LKRAMRKGAD VRGYFTWSLL DNFEWISGYT 480 IRFGMYHVDF DTLERTPRLS ASWYKNFIFN HIAQSKDNED A* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 2.0e-121 | 46 | 508 | 466 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 1.0e-127 | 33 | 508 | 479 | + beta-glucosidase | ||
| COG2723 | BglB | 2.0e-149 | 46 | 508 | 474 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 5.0e-164 | 47 | 504 | 461 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 2.0e-171 | 44 | 511 | 477 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB36820.1 | 0 | 9 | 464 | 23 | 483 | beta-glucosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_193907.2 | 0 | 9 | 518 | 23 | 521 | BGLU47 (Beta-glucosidase 47); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002305594.1 | 0 | 8 | 508 | 1 | 494 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002305597.1 | 0 | 40 | 508 | 32 | 505 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518516.1 | 0 | 46 | 515 | 34 | 508 | beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 45 | 508 | 16 | 486 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3gnp_A | 0 | 45 | 508 | 16 | 486 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3gno_A | 0 | 45 | 508 | 16 | 486 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_B | 0 | 45 | 508 | 19 | 479 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_A | 0 | 45 | 508 | 19 | 479 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
