| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra038756 |
| Family | GH1 |
| Protein Properties | Length: 521 Molecular Weight: 60040.7 Isoelectric Point: 6.3301 |
| Chromosome | Chromosome/Scaffold: 03 Start: 24251084 End: 24253779 |
| Description | beta-glucosidase 47 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 43 | 510 | 0 |
| FSFPNDFLFGTASSAYQYEGAYLTDGKTLSNWDVFTSIPGKISDGTHGKVAVDHYHRYPEDLDLMQDLGVNSYRFSLSWARILPKGRLGDVNMEGIDHYN RMINAVLKRGMEPFVTLTHYDIPQELEHRYKSWLSPQIREDFEHYAAICFRHFGNRVKFWSTFNEPNVQVILGYRKGTYPPSRCSKTFANCTRGGSDIEP LVAAHNIIRSHLAAVNLYRTKFQEDQRGKIGIVMNTIWFEPVSDSLADRLAAERAQAFYLTWFLDPVVFGRYPREMKDILGEDLPEFTKDDLKRSKNGLD FIGINQYTSRYAKDCLHTACEPGQGGSRAEGFVYSNALKDGLPLGEPTGVNWFNVYPQGMEEMLMYATERYRNIPLYVTENGFGENNTGVLLNDYRRVEF MSNYLDALKTAMRKGADVRGYFTWSLLDNFEWISGYTIRFGMYHVDFDTLERTPRLSASWYKNFIFKN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 521 Download |
| MYISVCPLWI LCFITITLVS SSSSTTWYED HVSLREINTQ ENFSFPNDFL FGTASSAYQY 60 EGAYLTDGKT LSNWDVFTSI PGKISDGTHG KVAVDHYHRY PEDLDLMQDL GVNSYRFSLS 120 WARILPKGRL GDVNMEGIDH YNRMINAVLK RGMEPFVTLT HYDIPQELEH RYKSWLSPQI 180 REDFEHYAAI CFRHFGNRVK FWSTFNEPNV QVILGYRKGT YPPSRCSKTF ANCTRGGSDI 240 EPLVAAHNII RSHLAAVNLY RTKFQEDQRG KIGIVMNTIW FEPVSDSLAD RLAAERAQAF 300 YLTWFLDPVV FGRYPREMKD ILGEDLPEFT KDDLKRSKNG LDFIGINQYT SRYAKDCLHT 360 ACEPGQGGSR AEGFVYSNAL KDGLPLGEPT GVNWFNVYPQ GMEEMLMYAT ERYRNIPLYV 420 TENGFGENNT GVLLNDYRRV EFMSNYLDAL KTAMRKGADV RGYFTWSLLD NFEWISGYTI 480 RFGMYHVDFD TLERTPRLSA SWYKNFIFKN VGQRRNDDDA * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 3.0e-124 | 45 | 507 | 466 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 4.0e-132 | 44 | 507 | 467 | + beta-glucosidase | ||
| COG2723 | BglB | 6.0e-151 | 45 | 510 | 477 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 2.0e-165 | 46 | 503 | 461 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 1.0e-173 | 43 | 510 | 474 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB36820.1 | 0 | 1 | 463 | 16 | 483 | beta-glucosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_193907.2 | 0 | 1 | 517 | 16 | 521 | BGLU47 (Beta-glucosidase 47); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002305594.1 | 0 | 8 | 507 | 1 | 494 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002305597.1 | 0 | 39 | 507 | 32 | 505 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518516.1 | 0 | 45 | 507 | 34 | 501 | beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 44 | 507 | 16 | 486 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3gnp_A | 0 | 44 | 507 | 16 | 486 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3gno_A | 0 | 44 | 507 | 16 | 486 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_B | 0 | 44 | 507 | 19 | 479 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_A | 0 | 44 | 507 | 19 | 479 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
