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Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra038926 |
Family | GH100 |
Protein Properties | Length: 633 Molecular Weight: 71723.2 Isoelectric Point: 6.4494 |
Chromosome | Chromosome/Scaffold: 000155 Start: 228267 End: 230808 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 144 | 602 | 0 |
ESEAEKEAWRILEDAVVRYCGSPVGTVAANDPGDKLPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTV ALDENTTEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDFSLQERIDVQTGIKLIMNLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQS LFYSALRCSREMLSVNDSSSNLVRAISNRLSALSFHIREYYWVDIKKINEIYRYKTEEYSTDATNKFNIYPEQIPPWLMDWIPEQGGYLLGNLQPAHMDF RFFTLGNFWSVVSSLSTPKQNEAILNLIEAKWDDIIGNMPLKICYPALEYDDWRIITGSDPKNTPWSYHNSGSWPTLLWQFTLACMKMGRPELAEKALAL AEKRLMADRWPEYYDTRSGKFIGKQSRLYQTWTVAGFLTSKLLLANPEMASKLFWEEDY |
Full Sequence |
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Protein Sequence Length: 633 Download |
MSAIHLLRKL SKKPPSRLHR NLLSSTFSMD LPPDLARTTL IRPFSNHPAI FTNSHRLIPS 60 CFRQSNLLPN WVSEKTKSIG LSSREFSTSV VETNTSDRVV GLSPNPLVIE RIHKGEETIG 120 ESVSGGEIIG NEIKKSEETL VREESEAEKE AWRILEDAVV RYCGSPVGTV AANDPGDKLP 180 LNYDQVFIRD FVPSALAFLL KGEGEIVRNF LLHTLQLQSW EKTVDCYSPG QGLMPASFKV 240 RTVALDENTT EEVLDPDFGE SAIGRVAPVD SGLWWIILLR AYGKLTGDFS LQERIDVQTG 300 IKLIMNLCLA DGFDMFPTLL VTDGSCMIDR RMGIHGHPLE IQSLFYSALR CSREMLSVND 360 SSSNLVRAIS NRLSALSFHI REYYWVDIKK INEIYRYKTE EYSTDATNKF NIYPEQIPPW 420 LMDWIPEQGG YLLGNLQPAH MDFRFFTLGN FWSVVSSLST PKQNEAILNL IEAKWDDIIG 480 NMPLKICYPA LEYDDWRIIT GSDPKNTPWS YHNSGSWPTL LWQFTLACMK MGRPELAEKA 540 LALAEKRLMA DRWPEYYDTR SGKFIGKQSR LYQTWTVAGF LTSKLLLANP EMASKLFWEE 600 DYELLDICVC GLSKSGRRKC SRVAAKTQIL VR* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.003 | 187 | 350 | 174 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
pfam12899 | Glyco_hydro_100 | 0 | 150 | 590 | 441 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 148 | 631 | 486 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 150 | 604 | 455 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 150 | 604 | 455 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAP59645.1 | 0 | 91 | 631 | 115 | 674 | putative neutral invertase [Vitis vinifera] |
EMBL | CAP59646.1 | 0 | 91 | 631 | 115 | 674 | putative neutral invertase [Vitis vinifera] |
RefSeq | NP_176049.1 | 0 | 1 | 632 | 1 | 616 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002277312.1 | 0 | 91 | 631 | 104 | 662 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
RefSeq | XP_002512536.1 | 0 | 84 | 631 | 116 | 685 | beta-fructofuranosidase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 493 | 142 | 630 | 0 |
HO466454 | 470 | 149 | 618 | 0 |
DV161952 | 313 | 221 | 533 | 0 |
HO779905 | 397 | 226 | 618 | 0 |
GO872629 | 341 | 142 | 480 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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