| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039058 |
| Family | GT8 |
| Protein Properties | Length: 353 Molecular Weight: 39781.5 Isoelectric Point: 6.938 |
| Chromosome | Chromosome/Scaffold: 09 Start: 1342573 End: 1343631 |
| Description | galacturonosyltransferase-like 10 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 61 | 317 | 0 |
| AVHIAMTLDPAYLRGTVSAVHSLLKHTSCPQNIFFHFIASGSSHVKTLSSVFPSLSFKVYTFDETLVKDLISSSIRQALDSPLNYARSYLSEILSSCVHR VIYLDSDVIVVDDIKKLWKTSLTGSRTIGAPEYCHANFTKYFSDSFWSDPNLSRVFDSKTPCYFNTGVMVIDLVRWREGDYTRKIENWMRIQKEERIYEL GSLPPFLLVFSGEIEAIDHQWNQHGLGGDNVVSSCRSLHPGPVSLIHWSGKGKPWVR | |||
| Full Sequence |
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| Protein Sequence Length: 353 Download |
| MSGSRLIIFA IISATFFTVG SIRLLPEDAS SDFIEAPAYI NGPKCSVLPQ NRLLLACDPS 60 AVHIAMTLDP AYLRGTVSAV HSLLKHTSCP QNIFFHFIAS GSSHVKTLSS VFPSLSFKVY 120 TFDETLVKDL ISSSIRQALD SPLNYARSYL SEILSSCVHR VIYLDSDVIV VDDIKKLWKT 180 SLTGSRTIGA PEYCHANFTK YFSDSFWSDP NLSRVFDSKT PCYFNTGVMV IDLVRWREGD 240 YTRKIENWMR IQKEERIYEL GSLPPFLLVF SGEIEAIDHQ WNQHGLGGDN VVSSCRSLHP 300 GPVSLIHWSG KGKPWVRLDD GKPCPVDYLW APYDLHKSQR QYLQYNQELE IL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02523 | PLN02523 | 2.0e-13 | 141 | 316 | 176 | + galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 9.0e-16 | 141 | 333 | 193 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 5.0e-16 | 141 | 333 | 193 | + Probable galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 3.0e-21 | 62 | 318 | 279 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| pfam01501 | Glyco_transf_8 | 3.0e-51 | 63 | 319 | 261 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG43554.1 | 0 | 6 | 337 | 9 | 348 | AF211536_1 Avr9/Cf-9 rapidly elicited protein 231 [Nicotiana tabacum] |
| RefSeq | NP_189474.2 | 0 | 1 | 352 | 2 | 365 | GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_564983.1 | 0 | 33 | 344 | 51 | 372 | LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002271160.1 | 0 | 33 | 349 | 47 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002517421.1 | 0 | 9 | 350 | 15 | 361 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.0000002 | 141 | 317 | 80 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.0000004 | 145 | 317 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.0000004 | 145 | 317 | 84 | 254 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FY443064 | 284 | 1 | 284 | 0 |
| FY448253 | 263 | 1 | 263 | 0 |
| FY438003 | 235 | 116 | 350 | 0 |
| EX140025 | 242 | 1 | 242 | 0 |
| EV532034 | 225 | 126 | 350 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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