| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039137 |
| Family | AA2 |
| Protein Properties | Length: 320 Molecular Weight: 34705.2 Isoelectric Point: 9.0101 |
| Chromosome | Chromosome/Scaffold: 05 Start: 23805595 End: 23806807 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 44 | 302 | 0 |
| KVVFAAMKKAPTLGAPLLRMFFHDCFVRGCDGSVLLDSSNNQAEKNAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPTWEVET GRRDGRVSNINEVNLPSPFDNIAKLITDFRTKGLNEKDLVVLSGGHTIGMGHCPLMSNRLYNFTGRGDSDPSLDSEYATNLRKKCKPTDTTTALEMDPGS FKTFDVSYFKLVAKRRGLFQSDAALLDNSKTRAHVLEQARGSTFFHDFGVSMVKMGRTG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 320 Download |
| MAACKRLVVA CFFLVLLLAE ANAQGLKVGF YSKTCPHAEG IVKKVVFAAM KKAPTLGAPL 60 LRMFFHDCFV RGCDGSVLLD SSNNQAEKNA VPNLSLRGFG IIDDSKAALE KVCPGIVSCS 120 DILALVARDA MVALEGPTWE VETGRRDGRV SNINEVNLPS PFDNIAKLIT DFRTKGLNEK 180 DLVVLSGGHT IGMGHCPLMS NRLYNFTGRG DSDPSLDSEY ATNLRKKCKP TDTTTALEMD 240 PGSFKTFDVS YFKLVAKRRG LFQSDAALLD NSKTRAHVLE QARGSTFFHD FGVSMVKMGR 300 TGVLTGRAGE IRKMCRVPN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02608 | PLN02608 | 5.0e-9 | 132 | 309 | 186 | + L-ascorbate peroxidase | ||
| cd00314 | plant_peroxidase_like | 5.0e-20 | 54 | 300 | 272 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 6.0e-60 | 54 | 191 | 140 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 2.0e-94 | 24 | 319 | 304 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 1.0e-162 | 25 | 317 | 297 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_186768.1 | 0 | 1 | 319 | 1 | 321 | peroxidase 27 (PER27) (P27) (PRXR7) [Arabidopsis thaliana] |
| RefSeq | NP_197022.1 | 0 | 1 | 319 | 1 | 329 | peroxidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002268360.1 | 0 | 21 | 319 | 24 | 326 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002316610.1 | 0 | 7 | 319 | 11 | 327 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329191.1 | 0 | 13 | 315 | 17 | 323 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 26 | 319 | 3 | 304 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1pa2_A | 0 | 26 | 319 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1qgj_B | 0 | 26 | 319 | 2 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1qgj_A | 0 | 26 | 319 | 2 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1sch_B | 0 | 26 | 319 | 2 | 294 | A Chain A, Peanut Peroxidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
