| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039174 |
| Family | CE10 |
| Protein Properties | Length: 792 Molecular Weight: 88907.5 Isoelectric Point: 8.6949 |
| Chromosome | Chromosome/Scaffold: 05 Start: 23630159 End: 23635919 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE10 | 491 | 756 | 9.10844e-44 |
| QVRRSIVYGDQPRNRLDLYIPPPTSAGLKPVVVFVTGGAWIIGYKAWGSLLGLQLAERDIIVACLDYRNFPQGTISDMVRDVSQGISFVCNNISAFGGDP NRIYLMGQSAGAHISSCALIEQAIKESRGERISWSASQIKAYFGLSGGYNLFNMVEHFHNRGLYRSIFLSIMEGEESFEQYSPGIRLKEPRVRKAASLLT HIVLFHGSEDYSIPCEASKTFAEALQGVEVKTDLIIYNGKTHTDLFLQDPLRGGKDELFDHIVSMI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 792 Download |
| MAEGGDDPQR LKKIAAAAYE YDNDSRWVDY WSNILIPPHM ASRPEVVEHY KRKFYQRYVD 60 PDLVVEPMAS SSSSSQSARP SASTNANEQA RSRNSGSVPR TTGPSATSGV SSGRWDQQTI 120 QFSVNAWVFV IAVLAVLPLV PKNLSNRAYR LSFMGTACSS LYSLYSLYGR PSAWNMQGMQ 180 VYFQSIMGAK DFIYFIYCLT FVTSHLCLKF ALIPILCRAL EQLAKFLRRN FARSTIYRKY 240 LEDPCVWVES NTTTLNILSS QAEIAIGFLL IISLLSLSFY LLQMATQHYT DIHVLAAIEA 300 DVSSTSNSRI PPEHVEQNRE DGESHYPTVR SLLEYSGHCR PEMVVQVKNQ PKNAEEAKKG 360 RDKRRGETKH EIQYFFTADM QSSSEIHHHE RCRPVFPTEN IGPADSDKGK VRRRVLRKSS 420 APQICRQQSF GRDIGHAAAE TYLITRLSFD LLGYLGVGYR WITRLLALAC YAILLMPGFL 480 QVAYHYFFSP QVRRSIVYGD QPRNRLDLYI PPPTSAGLKP VVVFVTGGAW IIGYKAWGSL 540 LGLQLAERDI IVACLDYRNF PQGTISDMVR DVSQGISFVC NNISAFGGDP NRIYLMGQSA 600 GAHISSCALI EQAIKESRGE RISWSASQIK AYFGLSGGYN LFNMVEHFHN RGLYRSIFLS 660 IMEGEESFEQ YSPGIRLKEP RVRKAASLLT HIVLFHGSED YSIPCEASKT FAEALQGVEV 720 KTDLIIYNGK THTDLFLQDP LRGGKDELFD HIVSMIHAND SDGLSKDAVA PPRRRLVPEI 780 LLKLAGKVSP F* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1506 | DAP2 | 2.0e-9 | 508 | 732 | 242 | + Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | ||
| cd00312 | Esterase_lipase | 4.0e-10 | 506 | 602 | 110 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
| COG2272 | PnbA | 5.0e-12 | 489 | 609 | 139 | + Carboxylesterase type B [Lipid metabolism] | ||
| pfam00135 | COesterase | 4.0e-12 | 506 | 604 | 110 | + Carboxylesterase family. | ||
| COG0657 | Aes | 5.0e-21 | 493 | 732 | 246 | + Esterase/lipase [Lipid metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD96862.1 | 0 | 380 | 791 | 1 | 427 | hypothetical protein [Cleome spinosa] |
| GenBank | ABK28542.1 | 0 | 390 | 791 | 6 | 422 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_001118556.1 | 0 | 458 | 791 | 21 | 353 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_186890.2 | 0 | 390 | 791 | 6 | 422 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_197090.2 | 0 | 389 | 791 | 11 | 427 | ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1jmy_A | 0.000000005 | 492 | 617 | 69 | 220 | A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase |
| PDB | 2pbl_D | 0.000000005 | 491 | 622 | 38 | 160 | A Chain A, Crystal Structure Of A Putative Thioesterase (Tm1040_2492) From Silicibacter Sp. Tm1040 At 1.79 A Resolution |
| PDB | 2pbl_C | 0.000000005 | 491 | 622 | 38 | 160 | A Chain A, Crystal Structure Of A Putative Thioesterase (Tm1040_2492) From Silicibacter Sp. Tm1040 At 1.79 A Resolution |
| PDB | 2pbl_B | 0.000000005 | 491 | 622 | 38 | 160 | A Chain A, Crystal Structure Of A Putative Thioesterase (Tm1040_2492) From Silicibacter Sp. Tm1040 At 1.79 A Resolution |
| PDB | 2pbl_A | 0.000000005 | 491 | 622 | 38 | 160 | A Chain A, Crystal Structure Of A Putative Thioesterase (Tm1040_2492) From Silicibacter Sp. Tm1040 At 1.79 A Resolution |
