| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039274 |
| Family | AA1 |
| Protein Properties | Length: 570 Molecular Weight: 63666.8 Isoelectric Point: 7.9593 |
| Chromosome | Chromosome/Scaffold: 04 Start: 18787056 End: 18789119 |
| Description | laccase 6 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 29 | 552 | 0 |
| AATRIYHFKVQTMRLTRLCQTKEIVTINGKFPGPAITAQEDDNIVVNVINMTPYNATIHWHGIKQKLSCWYDGPSYITQCPIQSGQSFTYNFTVAQQKGT FFWHAHFSWLRATVYGPLIVYPKANVPYPFKKPFKEHTILLGEYWLKNVVELEKHVLESGGPPPPADAFTINGQPGPNYNCSSKDVYEIEIAPRKTYLLR LINAGINMESFFTIANHRLTIVEVDGEYTKPFTTERVMLVPGQTMNVLLTADQPIGRYSIAMGPYESAKNVKFQHTSAIASLRYFGAFPNSVASPAKLPV FNDNIAVKTVMDGLRSLKTVDVPEDVDAHLFITVGVNVNKCNSENPNNKCQGPRQGRLAASMNNISFNEPKVSILEAYYKKLEGYFTLDFPTVPEKSYDF VNGAPNDIANDTQAANGTRAMVFEYGSRIQIIFQNTGTLTTENHPIHLHGHSFYVIGYGTGNYDHRTARFNLEDPPYLNTIGVPVGGWAAIRFVADNPGL WLLHCHFDIHQTWGMSTMFIVKNG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 570 Download |
| MTSSSVSSLL RLSFCLFILQ VMNIGTCHAA TRIYHFKVQT MRLTRLCQTK EIVTINGKFP 60 GPAITAQEDD NIVVNVINMT PYNATIHWHG IKQKLSCWYD GPSYITQCPI QSGQSFTYNF 120 TVAQQKGTFF WHAHFSWLRA TVYGPLIVYP KANVPYPFKK PFKEHTILLG EYWLKNVVEL 180 EKHVLESGGP PPPADAFTIN GQPGPNYNCS SKDVYEIEIA PRKTYLLRLI NAGINMESFF 240 TIANHRLTIV EVDGEYTKPF TTERVMLVPG QTMNVLLTAD QPIGRYSIAM GPYESAKNVK 300 FQHTSAIASL RYFGAFPNSV ASPAKLPVFN DNIAVKTVMD GLRSLKTVDV PEDVDAHLFI 360 TVGVNVNKCN SENPNNKCQG PRQGRLAASM NNISFNEPKV SILEAYYKKL EGYFTLDFPT 420 VPEKSYDFVN GAPNDIANDT QAANGTRAMV FEYGSRIQII FQNTGTLTTE NHPIHLHGHS 480 FYVIGYGTGN YDHRTARFNL EDPPYLNTIG VPVGGWAAIR FVADNPGLWL LHCHFDIHQT 540 WGMSTMFIVK NGKTVVESLP QPPADLPQC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 3.0e-74 | 26 | 548 | 568 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-81 | 21 | 560 | 580 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-85 | 31 | 547 | 559 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 29 | 569 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN75876.1 | 0 | 30 | 569 | 32 | 571 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_182180.1 | 0 | 1 | 569 | 1 | 569 | LAC6 (laccase 6); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002264410.1 | 0 | 30 | 569 | 32 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320207.1 | 0 | 41 | 569 | 1 | 529 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523314.1 | 0 | 30 | 569 | 33 | 572 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 32 | 559 | 4 | 536 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1asq_A | 0 | 32 | 559 | 4 | 536 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1asp_B | 0 | 32 | 559 | 4 | 536 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1asp_A | 0 | 32 | 559 | 4 | 536 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1aso_B | 0 | 32 | 559 | 4 | 536 | A Chain A, Human Beta-Hexosaminidase B |
