| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039388 |
| Family | AA1 |
| Protein Properties | Length: 555 Molecular Weight: 61976.4 Isoelectric Point: 9.348 |
| Chromosome | Chromosome/Scaffold: 000164 Start: 230235 End: 232291 |
| Description | SKU5 similar 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 45 | 503 | 0 |
| PQQVILINGQFPGPNLNSTSNNNVIINVFNNLDEPFLLTWNGIQHRKNCWQDGTPGTMCPIPAGTNYTYHFQPKDQIGSYFYYPTTAMHRAAGGFGGLRV NSRLLIPIPYDVPEDDYTVLIGDWYTKSHTQLKKFLDGGRTLGRPNGVLINGKAGKGDGSDAPLFTLKPGKSYRVRICNVGLKTSLNFRIQNHKMKLVEM EGSHVLQNDFDSLDVHVGQCFGTIVTANQEPKDYYMVASSRFLKSVITTTGLLRYEGGKGPASSQLPAGPVGWAWSLNQFRSFRWNLTSNAARPNPQGSY HYGKINITRTIKLVNTQGKVDGKLRYALNGISHTDLETPLKLAEYFGIADKVFKYNSVDNPTPEQTKSIKIEPHVLNITHRNFIEVVFENHEKSVQSWHL NGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNIRSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 555 Download |
| MRGAKLLAAC LYLAAAATLV VQAEDPYFHH VWNVTYGTAS PLGVPQQVIL INGQFPGPNL 60 NSTSNNNVII NVFNNLDEPF LLTWNGIQHR KNCWQDGTPG TMCPIPAGTN YTYHFQPKDQ 120 IGSYFYYPTT AMHRAAGGFG GLRVNSRLLI PIPYDVPEDD YTVLIGDWYT KSHTQLKKFL 180 DGGRTLGRPN GVLINGKAGK GDGSDAPLFT LKPGKSYRVR ICNVGLKTSL NFRIQNHKMK 240 LVEMEGSHVL QNDFDSLDVH VGQCFGTIVT ANQEPKDYYM VASSRFLKSV ITTTGLLRYE 300 GGKGPASSQL PAGPVGWAWS LNQFRSFRWN LTSNAARPNP QGSYHYGKIN ITRTIKLVNT 360 QGKVDGKLRY ALNGISHTDL ETPLKLAEYF GIADKVFKYN SVDNPTPEQT KSIKIEPHVL 420 NITHRNFIEV VFENHEKSVQ SWHLNGYSFF AVAVEPGTWT PEKRKNYNLL DAVSRHTVQV 480 YPKCWAAILL TFDNCGMWNI RSENTERRYL GQQLYVSVLS PEKSLRDEYN MPETSLQCGL 540 VKNTPKPANP YAGA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 20 | 553 | 535 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 20 | 539 | 521 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 21 | 539 | 521 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 21 | 547 | 530 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 26 | 542 | 529 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA47176.1 | 0 | 1 | 554 | 1 | 554 | Bplo [Brassica napus] |
| EMBL | CAA47177.1 | 0 | 1 | 554 | 1 | 555 | Bplo [Brassica napus] |
| EMBL | CAA47178.1 | 0 | 1 | 554 | 1 | 555 | Bplo [Brassica napus] |
| RefSeq | NP_175953.1 | 0 | 3 | 554 | 4 | 555 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Swiss-Prot | Q00624 | 0 | 1 | 554 | 1 | 555 | ASOL_BRANA RecName: Full=L-ascorbate oxidase homolog; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 29 | 539 | 5 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asq_A | 0 | 29 | 539 | 5 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_B | 0 | 29 | 539 | 5 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_A | 0 | 29 | 539 | 5 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1aso_B | 0 | 29 | 539 | 5 | 539 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
