| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039389 |
| Family | AA1 |
| Protein Properties | Length: 521 Molecular Weight: 58479.4 Isoelectric Point: 9.3362 |
| Chromosome | Chromosome/Scaffold: 000164 Start: 234245 End: 236500 |
| Description | SKU5 similar 13 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 35 | 503 | 0 |
| YGTVAPLGIPQQVILINGQFPGPNLNSTSNNNVVINVFNNLDEPFLLTWSGLQHRKNSWQDGVTGTSCPIPAGTNYTYHFQPKDQIGSYFYYPSTALHRF SGGFGGLRFNSRLLIPVPYADPEDDHTILINDWYTKSHTALKTFLDSGRTLGSPDGVLINGKSGKVGGQNKPLFTMKPGKTYKYRICNVGFKSTLNFRIQ GHKMKLVEMEGSHVLQNDYDSLDVHVGQCFAVLVTADQEAKSYYMVASTRFLKKEVSTVGVMSYEGSNVQPSNVLPKAPVGWAWSLNQFRSFRWNLTASA ARPNPQGSYHYGKINITRTIKLANTKNLVDGKVRFGLNGVSHVDTETPLKLAEYFEMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEIVFENH EKSMQSFHLDGYSFFSVASEPGTWTPEKRNNYNLLDAVSRHTVQVFPKSWSAILLTFDNAGMWNIKSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 521 Download |
| MQGGRLLTVF VCLVSTVALV NAGDPYFYYT WNVTYGTVAP LGIPQQVILI NGQFPGPNLN 60 STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT SCPIPAGTNY TYHFQPKDQI 120 GSYFYYPSTA LHRFSGGFGG LRFNSRLLIP VPYADPEDDH TILINDWYTK SHTALKTFLD 180 SGRTLGSPDG VLINGKSGKV GGQNKPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL 240 VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQEAKSYYMV ASTRFLKKEV STVGVMSYEG 300 SNVQPSNVLP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK 360 NLVDGKVRFG LNGVSHVDTE TPLKLAEYFE MSEKVFKYNV IKDEPAAKIT TLTVEPNVLN 420 ITFRTFVEIV FENHEKSMQS FHLDGYSFFS VASEPGTWTP EKRNNYNLLD AVSRHTVQVF 480 PKSWSAILLT FDNAGMWNIK SENWERRYLG QQMYVSVLSP * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02354 | PLN02354 | 0 | 1 | 520 | 521 | + copper ion binding / oxidoreductase |
| PLN02835 | PLN02835 | 0 | 6 | 520 | 516 | + oxidoreductase |
| PLN02991 | PLN02991 | 0 | 13 | 520 | 509 | + oxidoreductase |
| PLN02792 | PLN02792 | 0 | 14 | 520 | 511 | + oxidoreductase |
| PLN02168 | PLN02168 | 0 | 6 | 517 | 523 | + copper ion binding / pectinesterase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10639.1 | 0 | 4 | 520 | 3 | 528 | putative pollen specific protein [Arabidopsis thaliana] |
| RefSeq | NP_175953.1 | 0 | 1 | 520 | 1 | 523 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_187948.1 | 0 | 1 | 520 | 1 | 520 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_564697.1 | 0 | 4 | 520 | 3 | 519 | sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Swiss-Prot | Q00624 | 0 | 24 | 520 | 25 | 522 | ASOL_BRANA RecName: Full=L-ascorbate oxidase homolog; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 497 | 5 | 503 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asq_A | 0 | 28 | 497 | 5 | 503 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_B | 0 | 28 | 497 | 5 | 503 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_A | 0 | 28 | 497 | 5 | 503 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1aso_B | 0 | 28 | 497 | 5 | 503 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
