| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039460 |
| Family | CE10 |
| Protein Properties | Length: 397 Molecular Weight: 44301.5 Isoelectric Point: 6.6328 |
| Chromosome | Chromosome/Scaffold: 05 Start: 23446464 End: 23448014 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 100 | 388 | 0 |
| DRKVTANANPEDGVFSFDVVIDRATSLLSRVYRPAYADQEGGPVSVLDLEKPLDNEIVPVILFFHGGSFAHSSSNSKIYDTLCRRLVGACSCVVVSVNYR RAPESPYPCAYDDGWTALNWVNTRTWLKSKKDSKVRIFLAGDSSGGNIVHNVALKAGEAGIDVLGNVLLNPMFGGEERTESEKRLDGKYFVTVRDRDWYW KAFLPEGEDREHPACNPFGARARSLRGLRFPKSLVVVAGLDLIQDWQLAYAEGLERAGKEVKLVHLEKATIGFYLLPNNSYFHSVMDEI | |||
| Full Sequence |
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| Protein Sequence Length: 397 Download |
| MPVLKLQLNP FDLKFITWFE FSLLDSKVST FRSELFVSTV FVLTKGVSAS MAASDEVNLI 60 DSKTVVPLNT WVLISTFKLS YNLLRRSDGT FNRHLAEYLD RKVTANANPE DGVFSFDVVI 120 DRATSLLSRV YRPAYADQEG GPVSVLDLEK PLDNEIVPVI LFFHGGSFAH SSSNSKIYDT 180 LCRRLVGACS CVVVSVNYRR APESPYPCAY DDGWTALNWV NTRTWLKSKK DSKVRIFLAG 240 DSSGGNIVHN VALKAGEAGI DVLGNVLLNP MFGGEERTES EKRLDGKYFV TVRDRDWYWK 300 AFLPEGEDRE HPACNPFGAR ARSLRGLRFP KSLVVVAGLD LIQDWQLAYA EGLERAGKEV 360 KLVHLEKATI GFYLLPNNSY FHSVMDEIAA FVNAES* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10162 | PRK10162 | 1.0e-6 | 178 | 350 | 179 | + acetyl esterase; Provisional | ||
| COG0657 | Aes | 6.0e-31 | 67 | 395 | 333 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 1.0e-65 | 178 | 374 | 198 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2ZSH | 0 | 46 | 395 | 3 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| RefSeq | NP_187163.1 | 0 | 51 | 395 | 1 | 344 | GID1A (GA INSENSITIVE DWARF1A); hydrolase [Arabidopsis thaliana] |
| RefSeq | NP_198084.1 | 0 | 51 | 395 | 1 | 342 | GID1C (GA INSENSITIVE DWARF1C); hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002328407.1 | 0 | 51 | 393 | 1 | 341 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512310.1 | 0 | 51 | 392 | 1 | 340 | Gibberellin receptor GID1, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2zsi_A | 0 | 46 | 395 | 3 | 351 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 2zsh_A | 0 | 46 | 395 | 3 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 0 | 52 | 394 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_E | 0 | 52 | 394 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_D | 0 | 52 | 394 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES790010 | 383 | 15 | 397 | 0 |
| HO795605 | 346 | 52 | 397 | 0 |
| HO779605 | 348 | 51 | 397 | 0 |
| DT574934 | 324 | 69 | 391 | 0 |
| EV240117 | 309 | 89 | 397 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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