y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra039501 |
Family | GH1 |
Protein Properties | Length: 1060 Molecular Weight: 120228 Isoelectric Point: 7.2497 |
Chromosome | Chromosome/Scaffold: 05 Start: 9554696 End: 9565644 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 615 | 1038 | 0 |
EGKVVDGSNGDVAVDHYHRYKEDIELIEALGFSAYRFSISWSRIFPDGLGTEVNEEGIAFYNNIINSLLENGIQPFVTLYHWDLPSHLQESIGGWTNRKI VDYFGLYAEACFANFGDRVKHWITLNKPLQTSVNGHCIGIFAPGRNEKPLIEPYLVSHHQVLAHATAVSVYRSKYKESQGGQIGLSVDCEWAEANSEKME DKVAAGRRIDFQLGWFLDPLFFGDYPASMRQKFGDNLPTFTPEEKEFMLQNSWDFLGINHYTSRIIAHVSNNEAESDFYKAQELERNVEWEDGEPIGDRA ASDWLYIVPWGIRKTLNYVSEKYNHPSIFITENGMDDEDDGSASIHDMLDDKRRVAYFKSYLANVAESIKDGVDIKGYFAWSLLDNFEWVQGFTKRFGLV YVDYKNGLTRHPKSSAYWFMKFLK |
Full Sequence |
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Protein Sequence Length: 1060 Download |
MSDHQKIHPV SDPEAPPPAH PTAPLVPRGS SRSEHGDPTK ESVTQPPLLD TPPRKKRGSC 60 CCRCVCYTLL VIFLLIVIVG AAVGILYLVF RPKLPDYNID RLQLTRFTLN QDSSLSTAFN 120 VTITAKNPNE KIGIYYEDGS RISVLYMQTR LSNGSLPKFY QGHENTTIIF VEMTGYTQNA 180 TSLMATLQEQ QQLTGSIPLR IRVIQPVRIK LGKLKLMEVK FMVRCGVSVD SLAANNVISV 240 RSNQPCLSFF TFKESASHHQ FRVVSLSLLH QVTKKAHQSA GSLISDWFGL VLPLIRSDLT 300 SGPAFIRLLG WFSSVSPFIM LCFVLAISYT YMGSSISYVL LIWQISKGKI SSMRMRMNLF 360 TWNPLAPLDG GNLKNIGGKI GNIDTMELSE GRLLVDLDTR KALVFTKKEM IVIIISHNGR 420 QLLKSSEIIS YRTSHSKNQH NNRFERNARR YDYNQERALR RPGDNRWFRP APRHSRPYVP 480 YEHKNEHKKL QTWREYDKRA DFGKSVPDDP ISSQLKVSHT GRKLASIIIT PSREDFASEI 540 NVTFHNKGAA RAITFSPTEK DNLYNAPDNG QVVGTLQGME IGDSTTIVDQ QNETMVECDV 600 LGDDLLGEEL EAMEEGKVVD GSNGDVAVDH YHRYKEDIEL IEALGFSAYR FSISWSRIFP 660 DGLGTEVNEE GIAFYNNIIN SLLENGIQPF VTLYHWDLPS HLQESIGGWT NRKIVDYFGL 720 YAEACFANFG DRVKHWITLN KPLQTSVNGH CIGIFAPGRN EKPLIEPYLV SHHQVLAHAT 780 AVSVYRSKYK ESQGGQIGLS VDCEWAEANS EKMEDKVAAG RRIDFQLGWF LDPLFFGDYP 840 ASMRQKFGDN LPTFTPEEKE FMLQNSWDFL GINHYTSRII AHVSNNEAES DFYKAQELER 900 NVEWEDGEPI GDRAASDWLY IVPWGIRKTL NYVSEKYNHP SIFITENGMD DEDDGSASIH 960 DMLDDKRRVA YFKSYLANVA ESIKDGVDIK GYFAWSLLDN FEWVQGFTKR FGLVYVDYKN 1020 GLTRHPKSSA YWFMKFLKGD EDNKGKKEWK TEKGNPKLL* 1080 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 4.0e-102 | 620 | 1040 | 434 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-103 | 620 | 1042 | 434 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-132 | 620 | 1048 | 436 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-152 | 620 | 1033 | 418 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 7.0e-164 | 620 | 1039 | 426 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP51059.1 | 0 | 615 | 1047 | 59 | 489 | latex cyanogenic beta glucosidase [Hevea brasiliensis] |
GenBank | ABW76289.1 | 0 | 612 | 1048 | 59 | 493 | beta-glucosidase G4 [Medicago truncatula] |
RefSeq | NP_001031975.1 | 0 | 615 | 1044 | 57 | 486 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_198505.2 | 0 | 615 | 1048 | 57 | 490 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270406.1 | 0 | 615 | 1048 | 596 | 1027 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 616 | 1038 | 54 | 487 | A Chain A, Crystal Structure Of A Putative Cellobiose-phosphate Cleavage Protein (ef3048) From Enterococcus Faecalis V583 At 1.70 A Resolution |
PDB | 3gnp_A | 0 | 616 | 1038 | 54 | 487 | A Chain A, Crystal Structure Of A Putative Cellobiose-phosphate Cleavage Protein (ef3048) From Enterococcus Faecalis V583 At 1.70 A Resolution |
PDB | 3gno_A | 0 | 616 | 1038 | 54 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f5l_B | 0 | 612 | 1038 | 53 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3f5l_A | 0 | 612 | 1038 | 53 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |