| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039824 |
| Family | GH1 |
| Protein Properties | Length: 553 Molecular Weight: 63045.3 Isoelectric Point: 8.5061 |
| Chromosome | Chromosome/Scaffold: 000178 Start: 95587 End: 98232 |
| Description | thioglucoside glucohydrolase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 40 | 524 | 0 |
| SKSFPKDFIFGVASAAYQACYKSTIFDVEGGRGRGLNVWDGFTHRYPEKGGSDHGNGDTTCESYTRWQKDIDIIDELNATGYRFSFAWSRIIPKGKVSRG VNKGGIEYYHKLLDGLIAKNITPFVTLYHWDLPQTLQDEYEGFLNRTVIDDFRDYADLCFKEFGGKVKNWITINQLYTVPTRGYAIGTDAPGRCSPAVDE RCYGGNSSTEPYIVAHNQLLAHAAAVDVYRRKYKFQKGKIGPVMITRWFLPFDETDASRDAAERMKEFFLGWFMEPLTKGRYPDIMREIVGSRLPNFTEA EAELVAGSYDFLGLNYYTTQYAQAKPNPVTWANHTAMMDPGAKLTYNNSRGENLGPLFVKDEKNGNAYYYPKGIYYVMDYFKTKYSNPLIYITENGFSTP GEENRDKAIADSKRIDYLCSHLCFLRKVIREKGVNIKGYFAWALGDNYEFCKGFTVRFGLSYVNWTDLNDRNLKDSGKWYQSFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 553 Download |
| MKLHGLALIG FLIAVVSCKA IEECRENEPF TCGNTDQLSS KSFPKDFIFG VASAAYQACY 60 KSTIFDVEGG RGRGLNVWDG FTHRYPEKGG SDHGNGDTTC ESYTRWQKDI DIIDELNATG 120 YRFSFAWSRI IPKGKVSRGV NKGGIEYYHK LLDGLIAKNI TPFVTLYHWD LPQTLQDEYE 180 GFLNRTVIDD FRDYADLCFK EFGGKVKNWI TINQLYTVPT RGYAIGTDAP GRCSPAVDER 240 CYGGNSSTEP YIVAHNQLLA HAAAVDVYRR KYKFQKGKIG PVMITRWFLP FDETDASRDA 300 AERMKEFFLG WFMEPLTKGR YPDIMREIVG SRLPNFTEAE AELVAGSYDF LGLNYYTTQY 360 AQAKPNPVTW ANHTAMMDPG AKLTYNNSRG ENLGPLFVKD EKNGNAYYYP KGIYYVMDYF 420 KTKYSNPLIY ITENGFSTPG EENRDKAIAD SKRIDYLCSH LCFLRKVIRE KGVNIKGYFA 480 WALGDNYEFC KGFTVRFGLS YVNWTDLNDR NLKDSGKWYQ SFINGTNKNP AKQYFRRPNL 540 SFQNQKKKLA DA* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02849 | PLN02849 | 7.0e-114 | 35 | 533 | 502 | + beta-glucosidase |
| COG2723 | BglB | 3.0e-117 | 41 | 529 | 500 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] |
| PLN02814 | PLN02814 | 9.0e-119 | 35 | 526 | 502 | + beta-glucosidase |
| TIGR03356 | BGL | 4.0e-128 | 44 | 519 | 491 | + beta-galactosidase. |
| pfam00232 | Glyco_hydro_1 | 0 | 39 | 528 | 496 | + Glycosyl hydrolase family 1. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX68547.1 | 0 | 3 | 552 | 4 | 548 | myrosinase [Brassica rapa var. parachinensis] |
| GenBank | ABG77972.1 | 0 | 17 | 552 | 17 | 548 | myrosinase [Brassica oleracea var. alboglabra] |
| GenBank | ABS30827.1 | 0 | 17 | 552 | 17 | 546 | myrosinase [Brassica oleracea] |
| DDBJ | BAE16356.1 | 0 | 1 | 552 | 1 | 545 | myrosinase [Eutrema wasabi] |
| EMBL | CAA55685.1 | 0 | 1 | 552 | 1 | 547 | myrosinase [Brassica napus] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1myr_A | 0 | 24 | 524 | 6 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 2wxd_M | 0 | 24 | 524 | 6 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9d_M | 0 | 24 | 524 | 6 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9b_M | 0 | 24 | 524 | 6 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1e73_M | 0 | 24 | 524 | 6 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| glucosinolate breakdown | RXN-8134 | EC-3.2.1.147 | thioglucosidase |
| glucosinolate breakdown (via thiocyanate-forming protein) | RXN-12024 | EC-3.2.1.147 | thioglucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
