| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra039938 |
| Family | GT34 |
| Protein Properties | Length: 449 Molecular Weight: 52065.1 Isoelectric Point: 6.7898 |
| Chromosome | Chromosome/Scaffold: 09 Start: 31709924 End: 31711270 |
| Description | Galactosyl transferase GMA12/MNN10 family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT34 | 122 | 396 | 0 |
| NRTVMITGSQSGPCKNPIGDHLLLRFFKNKVDYCRIHGHDIFYSNALLHPKMKSFWAKLPAVKAAMIAHPEAEWIWWVDSDALFTDMDFTPPFHRYRDHN LVVHGWPGVVYDERSWTALNAGVFLIRNCQWSMELIDTWTSMGPVSPDFAKWGEIQRSIFKDKLFPESDDQTALIYLLFKHKEVYYPKIYLEGEYYFEGY WLEIVPGLANITERYLEMEREDATLRRRHAEKVSERYAAFREERFLRGESGGKGSKRRPFVTHFTGCQPCSGDHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MVSPEASHFQ SSPMAKYTGA RTRPVICFND VVLFLGGAFM SLILVWSFFS FSNSPNLTFS 60 PDKTDASTKC TRGIDMRYDP TDPVFYDDPD LSYTIEKPVK NWDEKRKRWL ELHPSFIPGS 120 ENRTVMITGS QSGPCKNPIG DHLLLRFFKN KVDYCRIHGH DIFYSNALLH PKMKSFWAKL 180 PAVKAAMIAH PEAEWIWWVD SDALFTDMDF TPPFHRYRDH NLVVHGWPGV VYDERSWTAL 240 NAGVFLIRNC QWSMELIDTW TSMGPVSPDF AKWGEIQRSI FKDKLFPESD DQTALIYLLF 300 KHKEVYYPKI YLEGEYYFEG YWLEIVPGLA NITERYLEME REDATLRRRH AEKVSERYAA 360 FREERFLRGE SGGKGSKRRP FVTHFTGCQP CSGDHNTMYN GDTCWNGMIK AINFADNQVM 420 RRYGFVHSDL GKTSPLQPVP FDYPDEPW* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05637 | Glyco_transf_34 | 2.0e-74 | 121 | 395 | 299 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
| PLN03182 | PLN03182 | 9.0e-138 | 14 | 431 | 433 | + xyloglucan 6-xylosyltransferase; Provisional | ||
| PLN03181 | PLN03181 | 0 | 1 | 447 | 454 | + glycosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_565544.1 | 0 | 1 | 448 | 1 | 449 | galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] |
| RefSeq | NP_680773.1 | 0 | 14 | 448 | 1 | 432 | galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] |
| RefSeq | XP_002310890.1 | 0 | 1 | 448 | 1 | 457 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320005.1 | 0 | 1 | 448 | 1 | 458 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525290.1 | 0 | 1 | 448 | 1 | 446 | transferase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
| xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
