y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra040252 |
Family | GH100 |
Protein Properties | Length: 629 Molecular Weight: 71630.8 Isoelectric Point: 6.5155 |
Chromosome | Chromosome/Scaffold: 01 Start: 28329249 End: 28332106 |
Description | invertase H |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 140 | 599 | 0 |
KEIEEEAWRLLRQSVVTYCDSPVGTMAANDPTDTAPLNYDQVFVRDFVPSALAFLMKGEGEIVRNFLLYTLQLQSWEKTVDCYSPGQGLMPASFKVRTSP LEEDKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERVDVQTGIKMIANLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQAL FYSALRSSREMITINDSSKNLVRTINNRLSAISFHIRENYWVDKGKINEIYRYKTEEYSTDATNKFNIYPDQVSPWLMDWIPESHRCGFLVGNLQPAHMD FRFFTLGNLWSIISSLGTPRQNQAILNLIEEKWDDLIGHMPLKICFPALESSEWHIITGSDPKNTPWSYHNGGSWPTLLWQFTLACMKMGRPELAEKAVT LAEKRLQADRWPEYYDTRYGKFIGKKSRLYQTWTIAGFLTAKQLLQNPEMASSLFWEEDL |
Full Sequence |
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Protein Sequence Length: 629 Download |
MNAIAFLGNS TMRPSKCLLR AFTRLSPSRD TAFQSHHSRC INQNINNQDP YRITKLRNVV 60 QFCTNRPSSV TTQVASEARN LSASRICTKD PTLDKIIAKN GLNVKPLTVE RLEEDEKDEE 120 VVNGDVRNID KDGLENVRRK EIEEEAWRLL RQSVVTYCDS PVGTMAANDP TDTAPLNYDQ 180 VFVRDFVPSA LAFLMKGEGE IVRNFLLYTL QLQSWEKTVD CYSPGQGLMP ASFKVRTSPL 240 EEDKFEEVLD PDFGESAIGR VAPVDSGLWW IILLRAYGKI TGDYSLQERV DVQTGIKMIA 300 NLCLADGFDM FPTLLVTDGS CMIDRRMGIH GHPLEIQALF YSALRSSREM ITINDSSKNL 360 VRTINNRLSA ISFHIRENYW VDKGKINEIY RYKTEEYSTD ATNKFNIYPD QVSPWLMDWI 420 PESHRCGFLV GNLQPAHMDF RFFTLGNLWS IISSLGTPRQ NQAILNLIEE KWDDLIGHMP 480 LKICFPALES SEWHIITGSD PKNTPWSYHN GGSWPTLLWQ FTLACMKMGR PELAEKAVTL 540 AEKRLQADRW PEYYDTRYGK FIGKKSRLYQ TWTIAGFLTA KQLLQNPEMA SSLFWEEDLE 600 LLETCVCVLT KSGRKSCSRA AAKSQILI* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06202 | GDE_C | 0.0008 | 264 | 547 | 304 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). | ||
pfam12899 | Glyco_hydro_100 | 0 | 145 | 587 | 443 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 131 | 628 | 500 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 145 | 598 | 454 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 145 | 601 | 457 | + beta-fructofuranosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004135 | amylo-alpha-1,6-glucosidase activity |
GO:0005978 | glycogen biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF26084.1 | 0 | 12 | 628 | 1 | 622 | AC012393_10 putative alkaline/neutral invertase [Arabidopsis thaliana] |
GenBank | AAO42161.1 | 0 | 1 | 628 | 1 | 633 | putative alkaline/neutral invertase [Arabidopsis thaliana] |
RefSeq | NP_187233.5 | 0 | 1 | 628 | 27 | 659 | beta-fructofuranosidase/ catalytic [Arabidopsis thaliana] |
RefSeq | XP_002280462.1 | 0 | 1 | 626 | 1 | 670 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512536.1 | 0 | 1 | 628 | 1 | 685 | beta-fructofuranosidase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 490 | 142 | 627 | 0 |
HO466454 | 481 | 136 | 616 | 0 |
HO779905 | 400 | 221 | 616 | 0 |
DV161952 | 319 | 216 | 534 | 0 |
GO872629 | 338 | 142 | 477 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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