| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra040275 |
| Family | GH1 |
| Protein Properties | Length: 598 Molecular Weight: 67896.9 Isoelectric Point: 8.9691 |
| Chromosome | Chromosome/Scaffold: 01 Start: 28140572 End: 28144168 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 61 | 292 | 1.29998e-41 |
| FFFGLATAPAHSEDELDDAWLQFAKETPSSASDAVPGSEAANRKKIKLAVGAITKGLAKNKHIKEVKAASADDKPPANNVAAWHNAPHAEDRLMFWSDPD KEVKLAKETGVTVFRMGIDWSRIMPKEPTEGIKEAVDYEALEHYKWILNRVRSNGMKVMLTLFHHSLPPWAADYGGWKIEKTVDYFMDFTRLVVDSMFEL VDSWVTFNEPHVFTLLTYMCGSWPGNNPDFME | |||
| Full Sequence |
|---|
| Protein Sequence Length: 598 Download |
| MNIVALLVKV AGLFATITVG ANAFSYTRFR RRNLGKIRSP IDESKEVLAD FNSHEHKEGK 60 FFFGLATAPA HSEDELDDAW LQFAKETPSS ASDAVPGSEA ANRKKIKLAV GAITKGLAKN 120 KHIKEVKAAS ADDKPPANNV AAWHNAPHAE DRLMFWSDPD KEVKLAKETG VTVFRMGIDW 180 SRIMPKEPTE GIKEAVDYEA LEHYKWILNR VRSNGMKVML TLFHHSLPPW AADYGGWKIE 240 KTVDYFMDFT RLVVDSMFEL VDSWVTFNEP HVFTLLTYMC GSWPGNNPDF MEMATSTLPM 300 GAVTISNSLT VYPYIDSISK KLDFIGINYY GQESVCGVGI KLVETDEYSE SGRGIYPDGL 360 YRVLLMLHER YKHLKIPFIV TENGVSDETD VIRRPYLIEH LLALYAAMLK ACGFCTKYER 420 NWNFGFRFGF GFEFGLGVPV LGYIFWTVSD NWEWADGYGP KFGLVAVDRS NNLARTLRPS 480 YHLFSKIVKS GKITRKDRSL AWNELQKAAK SGKLRPFYRA VDNHGLMYAD GLDKPQWRPY 540 VDRDWRFGHY QVEGLQDPLS RVARVLLIWP LIMNKRIRKV KVKHTDETGA AYASPFN* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-17 | 318 | 490 | 196 | + Glycosyl hydrolase family 1. | ||
| TIGR03356 | BGL | 4.0e-20 | 309 | 484 | 195 | + beta-galactosidase. | ||
| COG2723 | BglB | 3.0e-20 | 321 | 494 | 197 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-22 | 160 | 284 | 125 | + Glycosyl hydrolase family 1. | ||
| COG2723 | BglB | 7.0e-26 | 163 | 293 | 132 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51335.1 | 0 | 1 | 597 | 1 | 618 | AC020580_15 beta-glucosidase, putative; 69917-66834 [Arabidopsis thaliana] |
| GenBank | AAM65250.1 | 0 | 1 | 597 | 1 | 622 | beta-glucosidase, putative [Arabidopsis thaliana] |
| EMBL | CAD36513.1 | 0 | 1 | 597 | 1 | 622 | mutant putative beta-glycosidase [Arabidopsis thaliana] |
| RefSeq | NP_001118591.1 | 0 | 1 | 597 | 1 | 656 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_566285.1 | 0 | 1 | 597 | 1 | 622 | SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3apg_D | 5e-32 | 136 | 501 | 52 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_C | 5e-32 | 136 | 501 | 52 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_B | 5e-32 | 136 | 501 | 52 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 3apg_A | 5e-32 | 136 | 501 | 52 | 465 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
| PDB | 4ha4_A | 8e-31 | 155 | 494 | 59 | 469 | A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase From Pyrococcus Furiosus |
