| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra040355 |
| Family | GT1 |
| Protein Properties | Length: 639 Molecular Weight: 69722.4 Isoelectric Point: 6.2796 |
| Chromosome | Chromosome/Scaffold: 01 Start: 28025177 End: 28028465 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 200 | 608 | 0 |
| IVGTRGDVQPFVAIAKRLQEYGHRVRLATHANFKEFVLTAGLEFYPLGGDPKVLAEYMVKNKGFLPSGPSEIQIQRKQMKDIINSLLPACKEPDPDSGNS FKADAIIANPPAYGHTHVAEALRIPIHVFFTMPWTPTSEFPHPLSRVKQPAGYRLSYHIVDSLIWLGIRDMIKDLRKKKLKLRPVSYLSGTQGSGSNIPH GYMWSPNLVPKPKDWGPQIDVVGFCFLDLASNYEPPAELVEWLEAGDKPIYIGFGSLPVQEPEKMTEIIVEALQRTKQRGIINKGWGGLGNLKEPKDFVY LLDNVPHDWLFPRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPAPIPVDEFSLHKLEDAINFMLDEKVKSSAETLANEMKDEDG VAGAVKAFF | |||
| Full Sequence |
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| Protein Sequence Length: 639 Download |
| MPELSPAKLD RASSSSSSSS SDRTSVKIEE IEGGRCSAVV NGSEEVESKP DPPVASIADN 60 AVSESSGGGN KSFSRVWSMP VESSSSSDMA ESSSSSLSSP SSSKPKLVKS MSERQQILAE 120 DAAKIFDDTI SAGKKLKLLN RIATVKHDGS VEFEVPADAI PQPIPVDREE ESSRNGVCPD 180 ESIDGVDLQY IPHMQIVMLI VGTRGDVQPF VAIAKRLQEY GHRVRLATHA NFKEFVLTAG 240 LEFYPLGGDP KVLAEYMVKN KGFLPSGPSE IQIQRKQMKD IINSLLPACK EPDPDSGNSF 300 KADAIIANPP AYGHTHVAEA LRIPIHVFFT MPWTPTSEFP HPLSRVKQPA GYRLSYHIVD 360 SLIWLGIRDM IKDLRKKKLK LRPVSYLSGT QGSGSNIPHG YMWSPNLVPK PKDWGPQIDV 420 VGFCFLDLAS NYEPPAELVE WLEAGDKPIY IGFGSLPVQE PEKMTEIIVE ALQRTKQRGI 480 INKGWGGLGN LKEPKDFVYL LDNVPHDWLF PRCKAVVHHG GAGTTAAGLK AACPTTIVPF 540 FGDQPFWGER VHARGVGPAP IPVDEFSLHK LEDAINFMLD EKVKSSAETL ANEMKDEDGV 600 AGAVKAFFKH LPSTQPISPD HIPEPSGLLS FRRWFACS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01426 | MGT | 0.001 | 199 | 611 | 428 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
| COG1819 | COG1819 | 3.0e-32 | 194 | 615 | 435 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 5.0e-37 | 196 | 340 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 2.0e-117 | 194 | 610 | 421 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL09737.1 | 0 | 102 | 638 | 17 | 555 | AT3g07020/F17A9_17 [Arabidopsis thaliana] |
| DDBJ | BAH56996.1 | 0 | 1 | 535 | 1 | 534 | AT3G07020 [Arabidopsis thaliana] |
| EMBL | CAB06082.1 | 0 | 1 | 638 | 1 | 637 | UDP-glucose:sterol glucosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_566297.2 | 0 | 1 | 638 | 1 | 637 | UDP-glucose:sterol glucosyltransferase (UGT80A2) [Arabidopsis thaliana] |
| RefSeq | NP_850529.1 | 0 | 1 | 638 | 1 | 637 | UDP-glucose:sterol glucosyltransferase (UGT80A2) [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 1e-31 | 194 | 611 | 1 | 381 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3h4i_A | 1e-31 | 194 | 611 | 1 | 381 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 1e-25 | 194 | 599 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 1e-25 | 194 | 599 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1pnv_B | 7e-21 | 194 | 619 | 1 | 395 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 203 | 537 | 0 |
| GO883166 | 325 | 165 | 489 | 0 |
| HO626576 | 425 | 192 | 612 | 0 |
| CX664063 | 295 | 293 | 587 | 0 |
| GT046352 | 32 | 530 | 561 | 0.0004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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