| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra040364 |
| Family | GT48 |
| Protein Properties | Length: 1912 Molecular Weight: 219614 Isoelectric Point: 8.526 |
| Chromosome | Chromosome/Scaffold: 01 Start: 27986569 End: 27998037 |
| Description | glucan synthase-like 10 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1054 | 1792 | 0 |
| VPRNLEARRRLQFFTNSLFMDVPQPKPVHQMLSFSVFTPYCSEVVLYSMAELTKRNEDGISILFYLQKIYPDEWKNFLARIGKDENALEGDLHNERDILE LRFWASYRGQTLARTVRGMMYYRKALMLQSYLERKAGTVTDEESTLYGNNPTDAEGFELSPEARAQADLKFTYVVTCQMYGRQKEDQKPEAADIALLMQR NEALRIAYIDVVDTLKEVKYHKEYYSKLVKADIDGKDKEIYSIRLPGDPKLGQGKAENLNHAIVFTRGNAVQTIDVNQDNYFEEALKMRNLLEEFDRDHG IRPPTILGVREHVFTGSVSSLASFMSNQETTFVTLGQRVLAKPLKIRMNYGHSDVFDRVFHITRGGISKASRVINASEDIFAGLNSTLRQGNITHHEYIQ VGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLLDFFRMMSFYFTTVGFYFCTMLTVLTLYIFLYGKAYLAFSRVGATIRERAILVNNTAHSAAL SVQFLLQIGVFTAVPMILGFILEHGFLQAIVSFTAMQFQLCTVFFTFSLGTRAHYFGRTLLHGGASVCQQYQATRRGFVLKHIKFSENYRLYSRSHFVKG MEVILLLVVYLAYGNDEAGSVSYILLTVSSCFLAFSWLFAPYMFNPSGFERQKVVEDFKEWTKWLFYRGGGIGVEGAESWEAWWEEELSHIGTLSGRMVE TILSLRFFIFQYGIVYKLNVHGSDTSFAVYGWSWAAFAV | |||
| Full Sequence |
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| Protein Sequence Length: 1912 Download |
| MSRVEALWER LVNAALRRDR TGESAGGGCP GEGRDIDDIL RAADELQADD PVIARILCEH 60 AYSLAQKLDP NSESVSVLQF RTGLMSVIKQ RDEKREVETI NRSQDINRLQ GFYQRYREKN 120 NVDTLKEEEK QLCESGAFTD ELEQKTVERK RVFANLKVLE HVLEQVSKEI FEELKHANDS 180 DAAMSHEDTV AYNIVPFDAP VTANATTAFC EVQAAVTALK YFPGLPKLPA EFPLPATRNA 240 DMLDFLHYIF GFQRDSVSNQ REHIILLLSN EQSRLNIPGE TEHKLDDAAV SNVFLKSLDN 300 YIKWCDYLCI QPSWRNLEAI SGEKKLLYLS LYFLIWGEAA NIRFLPECLC YIFHHMVREM 360 DEILRQQVAR PAESCRPVDS CGSEDDVSFL DHVISPLYEV VSAEAFNNGN GRVPHSAWRN 420 YDDFNEYFWS LQSFELGWPW RTSSSFFQKP RPRAKFELKP GREKHRGKTS FVEHRTFLHL 480 YHSFHRLWIF LAMTFQALAI VAFNEKSLAS RKTLREILSL GPTYVVMKFS KSVLDVFMMY 540 GAYSTTRRLA VYRMFLRLIW FGLASVFISF LYVRALQEDS KPNSDSVMFT LYVIVIAIYG 600 GVQFFFGVLM RIPACHNIAN KCDGWTVVRF FKWMWRQERH YVGRGMYEKT SDFIKYLLFW 660 LVVLSAKFSF AYFLQIEPLV SPTRMIVKHG NIPYYWHDFV SRSYKYEIGP SGYVISSTII 720 GNYNALTVAS LWAPVASIYL LDIHIFYTLV SAFLGFFLGV RDRLGKGPYV ALPFSQIRSL 780 EEIHKQFKKF PGAFMRALHV PITNRFFFSY LHVFINSKVV DKKNRVEAAH FAPFWNQIIK 840 CLREEDYITD FEMDLLLMPK NYGSRLVQWP LFLLSTKILL ATEIAAESKS QEEIVKRIEK 900 DAYMKYAVEE VYYSLERVLI TTLEAEGKIW VDRIFRDIRT SITMRTIHLD FTLKKLSLVI 960 TRVTALLGVL KENETPENAA AVTKALQDLY DVMRLDILAV DMRGHYDAWN VITRASNEGR 1020 LFTKLKWPKD PEMKALVKRL YSLLTIKDST APHVPRNLEA RRRLQFFTNS LFMDVPQPKP 1080 VHQMLSFSVF TPYCSEVVLY SMAELTKRNE DGISILFYLQ KIYPDEWKNF LARIGKDENA 1140 LEGDLHNERD ILELRFWASY RGQTLARTVR GMMYYRKALM LQSYLERKAG TVTDEESTLY 1200 GNNPTDAEGF ELSPEARAQA DLKFTYVVTC QMYGRQKEDQ KPEAADIALL MQRNEALRIA 1260 YIDVVDTLKE VKYHKEYYSK LVKADIDGKD KEIYSIRLPG DPKLGQGKAE NLNHAIVFTR 1320 GNAVQTIDVN QDNYFEEALK MRNLLEEFDR DHGIRPPTIL GVREHVFTGS VSSLASFMSN 1380 QETTFVTLGQ RVLAKPLKIR MNYGHSDVFD RVFHITRGGI SKASRVINAS EDIFAGLNST 1440 LRQGNITHHE YIQVGKGRDV GLNQIALFEG KVAGGNGEQV LSRDVYRLGQ LLDFFRMMSF 1500 YFTTVGFYFC TMLTVLTLYI FLYGKAYLAF SRVGATIRER AILVNNTAHS AALSVQFLLQ 1560 IGVFTAVPMI LGFILEHGFL QAIVSFTAMQ FQLCTVFFTF SLGTRAHYFG RTLLHGGASV 1620 CQQYQATRRG FVLKHIKFSE NYRLYSRSHF VKGMEVILLL VVYLAYGNDE AGSVSYILLT 1680 VSSCFLAFSW LFAPYMFNPS GFERQKVVED FKEWTKWLFY RGGGIGVEGA ESWEAWWEEE 1740 LSHIGTLSGR MVETILSLRF FIFQYGIVYK LNVHGSDTSF AVYGWSWAAF AVILVIFKVF 1800 AFIQKIAVSF RLVRRFIQGL ALLVSLAGII VAVVLTELSV QDIFASVLAF LPTGWGILSI 1860 ACAWKPPIKR IGMWESVRSL ARLYDAGMGM LIFLASAFLS LFPFVSTFKH V* 1920 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam14288 | FKS1_dom1 | 2.0e-50 | 323 | 441 | 120 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1054 | 1802 | 834 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD25952.1 | 0 | 1 | 1885 | 1 | 1847 | AF085717_1 putative callose synthase catalytic subunit [Gossypium hirsutum] |
| RefSeq | NP_187372.4 | 0 | 1 | 1909 | 1 | 1913 | ATGSL10 (glucan synthase-like 10); 1,3-beta-glucan synthase [Arabidopsis thaliana] |
| Swiss-Prot | Q9SFU6 | 0 | 1 | 1909 | 1 | 1903 | CALS9_ARATH RecName: Full=Callose synthase 9; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 10 |
| RefSeq | XP_002285644.1 | 0 | 1 | 1909 | 1 | 1877 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528123.1 | 0 | 1 | 1885 | 1 | 1862 | 1,3-beta-glucan synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
