| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra040496 |
| Family | GH9 |
| Protein Properties | Length: 622 Molecular Weight: 69165.1 Isoelectric Point: 9.0587 |
| Chromosome | Chromosome/Scaffold: 000212 Start: 75432 End: 77946 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 108 | 583 | 0 |
| NYTIALHKALKFFNAQKSGKLPRHNNVSWRGSSGLQDGKGDSGSFYKDLVGGYYDAGDTIKFNFPMAYAMTMLSWSVIEYSAKYEAAGELAHVRELIKWG TDYFLKTFNSTADSIDDLVSQVGAGNTDDGSTDPNDHYCWMRPEDMDYKRPVTTCNGGCSDLAAEMAAALASASIVFKDNREYSKKLVHGAKTVYQFGRT RRGRYSAGTAESAKFYNSSMYWDEFIWGGAWLYYATGNVTYLDLITKPTMAKHAGAFWGGPYYGVFSWDNKLAGAQLLLSRLRLFLSPGYPYEEILRTFH NQTSIVMCSYLPYFNKFNRTRGGLIELNHGDPQPLQYAANAAFLATLYSDYLDAADTPGWYCGPNFYSTSVLRDFSRSQIDYILGKNPRKMSYLVGFGPK YPKHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKRDGFRDVRTNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MYGRDPWGGP LEINATDSAT DDDRSRNLND VDRAALSRPL DETQQSWLLG PTEQKKKKYV 60 DLGCIIVSRK IFVWTVGIVV AAALLAGFIT LIVKTVPRHH NKNPAPDNYT IALHKALKFF 120 NAQKSGKLPR HNNVSWRGSS GLQDGKGDSG SFYKDLVGGY YDAGDTIKFN FPMAYAMTML 180 SWSVIEYSAK YEAAGELAHV RELIKWGTDY FLKTFNSTAD SIDDLVSQVG AGNTDDGSTD 240 PNDHYCWMRP EDMDYKRPVT TCNGGCSDLA AEMAAALASA SIVFKDNREY SKKLVHGAKT 300 VYQFGRTRRG RYSAGTAESA KFYNSSMYWD EFIWGGAWLY YATGNVTYLD LITKPTMAKH 360 AGAFWGGPYY GVFSWDNKLA GAQLLLSRLR LFLSPGYPYE EILRTFHNQT SIVMCSYLPY 420 FNKFNRTRGG LIELNHGDPQ PLQYAANAAF LATLYSDYLD AADTPGWYCG PNFYSTSVLR 480 DFSRSQIDYI LGKNPRKMSY LVGFGPKYPK HVHHRGASIP KNKVKYNCKG GWKWRDSKKP 540 NPNTIEGAMV AGPDKRDGFR DVRTNYNYTE PTLAGNAGLV AALVALSGEE EASGTIDKNT 600 IFSAVPPLFP TPPPPPAPWR P* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 9.0e-111 | 64 | 571 | 519 | + endoglucanase | ||
| PLN02171 | PLN02171 | 7.0e-111 | 108 | 572 | 477 | + endoglucanase | ||
| PLN02340 | PLN02340 | 2.0e-111 | 105 | 572 | 480 | + endoglucanase | ||
| PLN02345 | PLN02345 | 3.0e-137 | 112 | 572 | 471 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 1.0e-165 | 108 | 572 | 470 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK59818.1 | 0 | 1 | 605 | 1 | 605 | AT5g49720/K2I5_8 [Arabidopsis thaliana] |
| GenBank | AAM63370.1 | 0 | 1 | 605 | 1 | 605 | cellulase homolog OR16pep precursor [Arabidopsis thaliana] |
| GenBank | AAN72232.1 | 0 | 1 | 605 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
| EMBL | CAB51903.1 | 0 | 1 | 605 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
| RefSeq | NP_199783.1 | 0 | 1 | 605 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ksc_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ks8_A | 0 | 108 | 586 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 108 | 595 | 5 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 108 | 595 | 5 | 447 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
