| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra040640 |
| Family | CE16 |
| Protein Properties | Length: 378 Molecular Weight: 41338.6 Isoelectric Point: 6.8498 |
| Chromosome | Chromosome/Scaffold: 000229 Start: 10574 End: 13016 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 96 | 366 | 2.1e-25 |
| RPYLDSVSTQSYLRGCNFAAGGSTIQKANAASFSPFSFAVQVSQFVTFKFKVLQLIQQDKTLENLPSEDHFKNGLYMFDIGQNDIAGAIYGKTVDQAAAV IPTIIKTFQDGINRLYWEGGARNFWIHNTGPIGCLAQMVSIFGKEKSKVDEFGCVIGHNEAAKLFNLQLQGLVRNFTQQYRDANFTYLDIFSIKSDLIQN HSKYGFDQSIMVCCGTGGPPLNYNDQINCGSTGTSNGTTVTSNACNDSSKYVNWDGIHYTEAANRFVSQKI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 378 Download |
| METVFHSLLI LLSFVAISHT QPLLAGSFPI SPNFAAVFNF GDSNSDTGEL TSGLGFRLPP 60 PNGQSFVFKP PSTGRFCDGR LIVDFLMEAI GRPYLRPYLD SVSTQSYLRG CNFAAGGSTI 120 QKANAASFSP FSFAVQVSQF VTFKFKVLQL IQQDKTLENL PSEDHFKNGL YMFDIGQNDI 180 AGAIYGKTVD QAAAVIPTII KTFQDGINRL YWEGGARNFW IHNTGPIGCL AQMVSIFGKE 240 KSKVDEFGCV IGHNEAAKLF NLQLQGLVRN FTQQYRDANF TYLDIFSIKS DLIQNHSKYG 300 FDQSIMVCCG TGGPPLNYND QINCGSTGTS NGTTVTSNAC NDSSKYVNWD GIHYTEAANR 360 FVSQKILSGT YSQTVSS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd01847 | Triacylglycerol_lipase_like | 2.0e-8 | 34 | 368 | 341 | + Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions. | ||
| pfam00657 | Lipase_GDSL | 8.0e-20 | 37 | 366 | 335 | + GDSL-like Lipase/Acylhydrolase. | ||
| cd01846 | fatty_acyltransferase_like | 1.0e-23 | 40 | 368 | 329 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 4.0e-24 | 5 | 373 | 387 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 4.0e-96 | 36 | 369 | 339 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM62882.1 | 0 | 15 | 377 | 15 | 376 | putative nodulin [Arabidopsis thaliana] |
| GenBank | AAN31927.1 | 0 | 25 | 377 | 1 | 352 | putative nodulin [Arabidopsis thaliana] |
| RefSeq | NP_187169.1 | 0 | 15 | 377 | 15 | 376 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002319029.1 | 0 | 7 | 372 | 12 | 364 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512338.1 | 0 | 5 | 372 | 8 | 364 | Alpha-L-fucosidase 2 precursor, putative [Ricinus communis] |
