| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra040686 |
| Family | CE16 |
| Protein Properties | Length: 352 Molecular Weight: 38982.5 Isoelectric Point: 7.9078 |
| Chromosome | Chromosome/Scaffold: 04 Start: 3995942 End: 3997467 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 105 | 342 | 5.1e-22 |
| IGANFASASSGYYDATSVPFGAIPLTRQLSYYRTYQNRVRSMIGRERARTMFSQSIHILSAGSSDFLQNYYINPLLNILNTPEQFSDTLMRSYSEFIQNL YELGARRIGVISLPPMGCLPAAITLFGAGNKSCVERLNNDAVMFNTKLESTTQTLMKRHSGLKLVAFNAYQPLMDIITNPYDNGFFETKRACCGTGTIET SFLCNSLSLGTCSNATGYVFWDGFHPTEAVYELLAGQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 352 Download |
| MQEMRVSRFW VLVLVSCFFC KSKGAIVPAL IMFGDSIVDV GNNNNLLSIV KSNFPPYGRD 60 FTNQTPTGRF CNGKLAVDFS AEYLGFSSYP PAFLNREARN EDFLIGANFA SASSGYYDAT 120 SVPFGAIPLT RQLSYYRTYQ NRVRSMIGRE RARTMFSQSI HILSAGSSDF LQNYYINPLL 180 NILNTPEQFS DTLMRSYSEF IQNLYELGAR RIGVISLPPM GCLPAAITLF GAGNKSCVER 240 LNNDAVMFNT KLESTTQTLM KRHSGLKLVA FNAYQPLMDI ITNPYDNGFF ETKRACCGTG 300 TIETSFLCNS LSLGTCSNAT GYVFWDGFHP TEAVYELLAG QLLSQGISLI S* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00657 | Lipase_GDSL | 3.0e-9 | 185 | 339 | 161 | + GDSL-like Lipase/Acylhydrolase. | ||
| COG3240 | COG3240 | 2.0e-18 | 30 | 344 | 324 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| cd01846 | fatty_acyltransferase_like | 3.0e-36 | 30 | 339 | 312 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 6.0e-107 | 1 | 343 | 343 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 6.0e-124 | 28 | 344 | 317 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB64213.1 | 0 | 4 | 351 | 1 | 315 | putative protein [Arabidopsis thaliana] |
| EMBL | CBI30208.1 | 0 | 12 | 350 | 12 | 350 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_190878.2 | 0 | 1 | 351 | 1 | 351 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002326231.1 | 0 | 9 | 351 | 11 | 351 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528628.1 | 0 | 7 | 351 | 5 | 352 | zinc finger protein, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
