PlantCAZyme

Basic Information
Species	Brachypodium distachyon
Cazyme ID	Bradi1g03207.1
Family	GH5
Protein Properties	Length: 445 Molecular Weight: 49295.2 Isoelectric Point: 6.098
Chromosome	Chromosome/Scaffold: 1 Start: 2118309 End: 2120063
Description	Glycosyl hydrolase superfamily protein
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

Signature Domain Download full data set without filtering
Family	Start	End	Evalue
GH5	17	348	2.9e-35
KRAVYLSGFNAYWLMMVASEPARRGKVTAAFRQAAAHGLNLARTWAFSDGGDRPLQSSPGVYDEAMFQGLDFVIAEAKRHGIYLLLCLTNNFDDFGGKRQ YVQWANAASGAGNLTSADDFFNSTITKDYYKNHVKRVVTRVNMVTGVPYKDDATIFGWELMNEPRCYADPTGAMVQAWVEEMAPYVKSIDGGQHLVTAGL EGFYGDGAHESKELNPWGIYYGTNYVATHSAPGIDFATIHLYPDVWLWGSTAARQAEFFRNWTAAHVRDTEIHLRKPLLVTEYGKFLWEDDDEAAANGTQ RRDYFLGMVLDAIYASASEGGPLVGGAFWQLL

Full Sequence
Protein Sequence Length: 445 Download
MVRVDGTRFV VGQGDSKRAV YLSGFNAYWL MMVASEPARR GKVTAAFRQA AAHGLNLART 60 WAFSDGGDRP LQSSPGVYDE AMFQGLDFVI AEAKRHGIYL LLCLTNNFDD FGGKRQYVQW 120 ANAASGAGNL TSADDFFNST ITKDYYKNHV KRVVTRVNMV TGVPYKDDAT IFGWELMNEP 180 RCYADPTGAM VQAWVEEMAP YVKSIDGGQH LVTAGLEGFY GDGAHESKEL NPWGIYYGTN 240 YVATHSAPGI DFATIHLYPD VWLWGSTAAR QAEFFRNWTA AHVRDTEIHL RKPLLVTEYG 300 KFLWEDDDEA AANGTQRRDY FLGMVLDAIY ASASEGGPLV GGAFWQLLID DDGMDGLRDG 360 YEIIFPEDAR AAGIISNHSR QLAELDGKFD DGVRRRRRRS SPRKIGSTSG GSWDGGSDIH 420 PHVQRLPTRF VSLFKDISSL FGTV*

Full Sequence

Protein Sequence Length: 445 Download

MVRVDGTRFV VGQGDSKRAV YLSGFNAYWL MMVASEPARR GKVTAAFRQA AAHGLNLART    60
WAFSDGGDRP LQSSPGVYDE AMFQGLDFVI AEAKRHGIYL LLCLTNNFDD FGGKRQYVQW    120
ANAASGAGNL TSADDFFNST ITKDYYKNHV KRVVTRVNMV TGVPYKDDAT IFGWELMNEP    180
RCYADPTGAM VQAWVEEMAP YVKSIDGGQH LVTAGLEGFY GDGAHESKEL NPWGIYYGTN    240
YVATHSAPGI DFATIHLYPD VWLWGSTAAR QAEFFRNWTA AHVRDTEIHL RKPLLVTEYG    300
KFLWEDDDEA AANGTQRRDY FLGMVLDAIY ASASEGGPLV GGAFWQLLID DDGMDGLRDG    360
YEIIFPEDAR AAGIISNHSR QLAELDGKFD DGVRRRRRRS SPRKIGSTSG GSWDGGSDIH    420
PHVQRLPTRF VSLFKDISSL FGTV* 

Functional Domains Download unfiltered results here
Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam00150	Cellulase	0.0004	44	300	259	+ Cellulase (glycosyl hydrolase family 5).
COG2730	BglC	0.0003	47	181	145	+ Endoglucanase [Carbohydrate transport and metabolism]
COG3934	COG3934	5.0e-6	146	345	212	+ Endo-beta-mannanase [Carbohydrate transport and metabolism]
COG3934	COG3934	1.0e-18	80	347	269	+ Endo-beta-mannanase [Carbohydrate transport and metabolism]

Gene Ontology
GO Term	Description
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	AAL79758.1	0	1	441	1	432	AC096687_22 putative endohydrolase [Oryza sativa Japonica Group]
GenBank	EAY92423.1	0	1	434	33	458	hypothetical protein OsI_14157 [Oryza sativa Indica Group]
GenBank	EAZ29139.1	0	1	433	1	424	hypothetical protein OsJ_13202 [Oryza sativa Japonica Group]
GenBank	EEC76450.1	0	1	441	1	433	hypothetical protein OsI_14158 [Oryza sativa Indica Group]
RefSeq	NP_001051777.1	0	1	441	23	454	Os03g0828500 [Oryza sativa (japonica cultivar-group)]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1rh9_A	0	1	385	6	372	A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB	3pzq_A	5.00264e-43	43	300	45	309	A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB	3pzo_A	5.00264e-43	43	300	45	309	A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB	3pzn_A	5.00264e-43	43	300	45	309	A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB	3pzm_A	5.00264e-43	43	300	45	309	A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)

EST Download unfiltered results here
Hit	Length	Start	End	EValue
JK974111	384	2	385	0
HO798074	366	20	385	0
HO794665	385	1	385	0
HO780470	356	30	385	0
DY296355	340	50	389	0

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_008_00275.1	Aquca_028_00132.1	Aquca_036_00154.1	Aquca_027_00015.1	Aquca_017_00156.1
	Aquca_036_00154.2	Aquca_008_00275.2	Aquca_010_00537.1	Aquca_023_00122.1	Aquca_023_00124.1
	Aquca_023_00123.1	Aquca_003_00212.1	Aquca_023_00122.2	Aquca_010_00537.3
Arabidopsis lyrata	491940	480902	349416	872461	887017
	470192	478424
Arabidopsis thaliana	AT4G28320.1	AT2G20680.1	AT5G01930.1	AT3G10890.1	AT5G66460.1
	AT1G02310.1	AT3G10900.1	AT3G30540.1
Brachypodium distachyon	Bradi2g49680.1	Bradi1g42770.1	Bradi4g44336.1	Bradi2g45790.1	Bradi3g57920.1
	Bradi4g44336.2
Brassica rapa	Bra026266	Bra031137	Bra036493	Bra005662	Bra034151
	Bra036494	Bra033312	Bra012074	Bra001383
Carica papaya	evm.model.supercontig_34.173	evm.model.supercontig_86.73	evm.model.supercontig_6.153	evm.model.supercontig_57.52	evm.model.supercontig_21.96
Capsella rubella	Carubv10004854m	Carubv10013751m	Carubv10012718m	Carubv10016461m	Carubv10028560m
	Carubv10011405m	Carubv10015594m	Carubv10016343m
Chlamydomonas reinhardtii	Cre01.g048350.t1.2	g8002.t2	g8002.t1	Cre02.g098000.t1.2	g12094.t1
	Cre07.g337750.t1.3
Citrus clementina	Ciclev10015394m	Ciclev10011654m	Ciclev10001262m	Ciclev10020376m	Ciclev10023981m
	Ciclev10025631m
Citrus sinensis	orange1.1g014151m	orange1.1g014902m	orange1.1g014373m	orange1.1g012093m	orange1.1g014426m
	orange1.1g015179m	orange1.1g016140m	orange1.1g013811m	orange1.1g048104m
Cucumis sativus	Cucsa.119110.1	Cucsa.137700.1	Cucsa.342570.1	Cucsa.127590.1	Cucsa.237330.1
	Cucsa.237320.1
Eucalyptus grandis	Eucgr.A01823.1	Eucgr.E03950.1	Eucgr.K01032.1	Eucgr.A00780.1	Eucgr.K00548.1
	Eucgr.K00551.1	Eucgr.K00550.1	Eucgr.I02413.1	Eucgr.F02943.1	Eucgr.F01879.1
	Eucgr.K00551.3	Eucgr.K00551.2
Fragaria vesca	mrna17714.1-v1.0-hybrid	mrna05501.1-v1.0-hybrid	mrna15177.1-v1.0-hybrid	mrna13566.1-v1.0-hybrid	mrna22956.1-v1.0-hybrid
Glycine max	Glyma13g37250.1	Glyma12g33200.1	Glyma06g44750.1	Glyma12g12770.1	Glyma03g00440.3
	Glyma03g00440.2	Glyma03g00440.1	Glyma16g34630.3	Glyma16g34630.2	Glyma16g34630.1
	Glyma19g41090.1	Glyma09g41000.1	Glyma03g38490.1	Glyma18g44810.1	Glyma14g07930.1
	Glyma19g41410.2	Glyma17g37090.1	Glyma09g35840.1	Glyma01g37720.2	Glyma12g01510.1
	Glyma04g03270.1	Glyma06g03350.1	Glyma03g38840.1	Glyma11g07580.1	Glyma01g37720.1
Gossypium raimondii	Gorai.005G201100.1	Gorai.010G186400.2	Gorai.013G075700.1	Gorai.010G186400.1	Gorai.011G124800.1
	Gorai.010G186400.3	Gorai.009G200500.2	Gorai.009G200500.1	Gorai.007G119100.1	Gorai.007G119100.2
	Gorai.007G201600.1	Gorai.005G120600.1	Gorai.001G149200.1	Gorai.007G119100.3
Linum usitatissimum	Lus10033687	Lus10039833	Lus10031650	Lus10018598	Lus10039032
	Lus10027329	Lus10014184	Lus10014288	Lus10025995	Lus10007900
	Lus10030347	Lus10007210	Lus10007211
Malus domestica	MDP0000322330	MDP0000709705	MDP0000417632	MDP0000832632	MDP0000321839
	MDP0000120098	MDP0000252855	MDP0000281231	MDP0000309661
Manihot esculenta	cassava4.1_008068m	cassava4.1_027705m	cassava4.1_006893m	cassava4.1_008562m	cassava4.1_025176m
	cassava4.1_007999m	cassava4.1_032265m
Medicago truncatula	Medtr4g078230.1	Medtr8g005670.1	Medtr8g005270.1	Medtr7g111740.1	Medtr5g020890.1
	Medtr4g043760.1	Medtr1g085310.1	Medtr1g085350.1	Medtr1g085320.1
Mimulus guttatus	mgv1a007803m	mgv1a005866m	mgv1a005847m	mgv1a006272m	mgv1a025011m
	mgv1a020287m	mgv1a025294m	mgv1a023976m	mgv1a011066m	mgv1a022814m
Oryza sativa	LOC_Os01g54300.1	LOC_Os06g20620.1	LOC_Os12g02520.1	LOC_Os02g52800.1	LOC_Os01g47400.1
	LOC_Os05g25480.1	LOC_Os03g61280.2	LOC_Os03g61280.1	LOC_Os01g47400.2
Panicum virgatum	Pavirv00037971m	Pavirv00037189m	Pavirv00037030m	Pavirv00015019m	Pavirv00042163m
	Pavirv00046651m	Pavirv00011599m	Pavirv00048102m	Pavirv00047147m	Pavirv00040471m
	Pavirv00030867m	Pavirv00021810m	Pavirv00035248m
Physcomitrella patens	Pp1s180_63V6.1	Pp1s41_160V6.1	Pp1s23_181V6.2	Pp1s429_16V6.1	Pp1s22_64V6.1
	Pp1s53_47V6.2	Pp1s53_47V6.1	Pp1s23_181V6.1	Pp1s115_190V6.1	Pp1s5_225V6.1
	Pp1s83_137V6.1
Phaseolus vulgaris	Phvul.004G108000.1	Phvul.011G118900.1	Phvul.010G058300.2	Phvul.010G058300.1	Phvul.008G081200.1
	Phvul.001G219800.1	Phvul.009G059700.1	Phvul.002G033500.1	Phvul.001G012600.1	Phvul.001G223100.1
Picea abies	MA_10426380g0010	MA_6558g0010	MA_10427065g0010	MA_58990g0010	MA_894609g0010
	MA_955078g0010	MA_45718g0010	MA_111906g0010	MA_69814g0010	MA_11130g0010
	MA_110162g0010	MA_953274g0010	MA_38956g0010	MA_10358593g0010	MA_134938g0010
	MA_10432193g0010	MA_71720g0010
Populus trichocarpa	Potri.013G130400.1	Potri.006G009400.1	Potri.016G138600.1	Potri.006G109900.3	Potri.016G138600.2
	Potri.006G109900.2	Potri.006G109900.1	Potri.016G014800.1	Potri.005G229600.3	Potri.005G229600.2
	Potri.005G229600.1	Potri.005G120500.1	Potri.007G022000.2	Potri.007G022000.1	Potri.002G184500.1
Prunus persica	ppa005783m	ppa006029m	ppa020168m	ppa005992m	ppa005849m
Ricinus communis	29983.m003185	29724.m000832	29915.m000486	30170.m014073	30076.m004513
Setaria italica	Si006454m	Si001340m	Si019677m	Si001544m	Si010209m
	Si024351m	Si035445m	Si027540m
Selaginella moellendorffii	101148	101525	232427	234867
Sorghum bicolor	Sb03g034420.1	Sb10g011830.1	Sb01g006080.1	Sb04g034200.1	Sb03g030340.1
	Sb01g002630.1	Sb05g001260.1
Thellungiella halophila	Thhalv10025261m	Thhalv10001990m	Thhalv10013730m	Thhalv10020842m	Thhalv10004263m
	Thhalv10007769m
Vitis vinifera	GSVIVT01020553001	GSVIVT01003344001	GSVIVT01003349001	GSVIVT01030163001	GSVIVT01030165001
	GSVIVT01009746001	GSVIVT01037214001	GSVIVT01037215001	GSVIVT01037212001	GSVIVT01037213001
	GSVIVT01018923001	GSVIVT01037211001	GSVIVT01037216001
Volvox carteri	Vocar20006216m

CAZyme Information