Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi1g13110.1 |
Family | GT47 |
Protein Properties | Length: 521 Molecular Weight: 58728.9 Isoelectric Point: 9.5227 |
Chromosome | Chromosome/Scaffold: 1 Start: 9937948 End: 9939510 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 103 | 451 | 0 |
CAGRYIYIHDLPPRFNSHLIRDCRTLSEWTDMCKHMANAGMGPQLTRTGGVLPAAGWYDTNQFALEVIFHNRMRNQYDCLTTDASRAAAFYVPYYAGLDV GRHLWGVQFNNTVRDALADDLVRWLRASPAWAAHGGKDHFLVAGRITWDFRREDQDGPGEWGSRLLVLPEARNMTMLVIESSPWHGNDVGVPYPTYFHPS RAAEVASWQKAVRRARRPWLLAFAGGARASSGNITNVRDVIMDQCARSRRCGLLRCDGAGRRNDCYAPGNVMRLFKKAAFCLQPQGDSYTRRSAFDAMLA GCVPVFFHPGSAYVQYRWHLPADQRAYSVFIPEDGLRNGTIRIEDVLRR |
Full Sequence |
---|
Protein Sequence Length: 521 Download |
MVSLHGSAVV RAGRYVLALV MPACFVIWMV FFFFPFPSPE VDVVRESFQA NINSSAGQQR 60 TVDAPPPPAR QERAETPSPP PPARQERISQ ARKPARKTEV DRCAGRYIYI HDLPPRFNSH 120 LIRDCRTLSE WTDMCKHMAN AGMGPQLTRT GGVLPAAGWY DTNQFALEVI FHNRMRNQYD 180 CLTTDASRAA AFYVPYYAGL DVGRHLWGVQ FNNTVRDALA DDLVRWLRAS PAWAAHGGKD 240 HFLVAGRITW DFRREDQDGP GEWGSRLLVL PEARNMTMLV IESSPWHGND VGVPYPTYFH 300 PSRAAEVASW QKAVRRARRP WLLAFAGGAR ASSGNITNVR DVIMDQCARS RRCGLLRCDG 360 AGRRNDCYAP GNVMRLFKKA AFCLQPQGDS YTRRSAFDAM LAGCVPVFFH PGSAYVQYRW 420 HLPADQRAYS VFIPEDGLRN GTIRIEDVLR RFRAKEVAAM REQVVRTIPS IVYRDPRATA 480 VTGGFRDAVD VAIDGVIERV RRIKRGLPPS DEEHEWDAYF * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-62 | 102 | 452 | 365 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA99677.1 | 0 | 1 | 520 | 1 | 523 | Exostosin family protein, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY83600.1 | 0 | 1 | 520 | 1 | 523 | hypothetical protein OsI_38822 [Oryza sativa Indica Group] |
GenBank | EEE53469.1 | 0 | 1 | 520 | 1 | 484 | hypothetical protein OsJ_36598 [Oryza sativa Japonica Group] |
RefSeq | NP_001147481.1 | 0 | 97 | 516 | 137 | 546 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
RefSeq | XP_002442366.1 | 0 | 1 | 520 | 1 | 583 | hypothetical protein SORBIDRAFT_08g018880 [Sorghum bicolor] |