Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g16230.1 |
Family | CBM43 |
Protein Properties | Length: 187 Molecular Weight: 18484.7 Isoelectric Point: 4.131 |
Chromosome | Chromosome/Scaffold: 1 Start: 13174803 End: 13177034 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 27 | 107 | 1.7e-29 |
CVCRSEESTAVLQKAIDYSCGQGADCTAIQQDGACYNPNDVASHCSWAVNSYFQKYRSSGATCDFTGAASLSSTDPSFSGC |
Full Sequence |
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Protein Sequence Length: 187 Download |
MEDAMMLVAA VLLLSPALVA SGVADFCVCR SEESTAVLQK AIDYSCGQGA DCTAIQQDGA 60 CYNPNDVASH CSWAVNSYFQ KYRSSGATCD FTGAASLSST DPSFSGCTFP SSASAAGTST 120 GTGTTTGGTF SPGMSPGFNG TGLGGSLSPT TGTSSMDGTA AAAGLLPSRK LTASLAILLL 180 PFLALP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-16 | 27 | 96 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-30 | 26 | 107 | 82 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF33186.1 | 5.99756e-43 | 15 | 105 | 11 | 98 | predicted pectin lyase-like family protein with X8 domain [Triticum turgidum subsp. dicoccoides] |
GenBank | EAZ04609.1 | 1.96182e-44 | 5 | 116 | 1 | 109 | hypothetical protein OsI_26758 [Oryza sativa Indica Group] |
GenBank | EAZ40556.1 | 2e-39 | 14 | 114 | 13 | 110 | hypothetical protein OsJ_25011 [Oryza sativa Japonica Group] |
RefSeq | NP_001050386.1 | 0 | 25 | 186 | 24 | 188 | Os03g0421800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465118.1 | 0 | 24 | 185 | 24 | 193 | hypothetical protein SORBIDRAFT_01g032330 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 15 | 114 | 2 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |