| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g18390.1 |
| Family | GH14 |
| Protein Properties | Length: 538 Molecular Weight: 57917.9 Isoelectric Point: 7.1325 |
| Chromosome | Chromosome/Scaffold: 1 Start: 14765285 End: 14767168 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 83 | 498 | 0 |
| FVGLPIDSVAPDGSSVSSAKAKGIEAGIRAVKLLGADGVELQVFWSVVQPESPDRFSWAGYRAVADMAAAEGLSLRVSLRIHGTPGGNVPILPGWVTAAA ASDPDILFTDRSGSRHEDCVSFAVDELPVLAGRSPLSRYEAFFRSFTDAFHDLFESTITDVTVGLGPNGELRYPSYPPGSSAATFTGVGEFQCYDKYMLA QLKQHAEESGHPLWGLSGPHDTPGYNESPDSKDFFRDHGGSWESPYGDFFLSWYAGNLVNHGDRVLGMASAVFGDKPVELSAKVPFMHWWHGAKSRPAEA VAGFYKSNKKNGYSPVAKMFARHGVTMVVPGMDVCMNKQHRSTGSSPDQLLVQIKNACRRHGARIAGENASLVMTHTSSFSRIRSNILTTERVRPSHFTY QRMGADFFSPKHWPAF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 538 Download |
| MEALLSTQHA AAASSPTMTR PLPGAAPAGR VAFGRARRAG RASRDAPRVA TGLGRLLGQA 60 AAAVADSKQS TRDAEDASTF RLFVGLPIDS VAPDGSSVSS AKAKGIEAGI RAVKLLGADG 120 VELQVFWSVV QPESPDRFSW AGYRAVADMA AAEGLSLRVS LRIHGTPGGN VPILPGWVTA 180 AAASDPDILF TDRSGSRHED CVSFAVDELP VLAGRSPLSR YEAFFRSFTD AFHDLFESTI 240 TDVTVGLGPN GELRYPSYPP GSSAATFTGV GEFQCYDKYM LAQLKQHAEE SGHPLWGLSG 300 PHDTPGYNES PDSKDFFRDH GGSWESPYGD FFLSWYAGNL VNHGDRVLGM ASAVFGDKPV 360 ELSAKVPFMH WWHGAKSRPA EAVAGFYKSN KKNGYSPVAK MFARHGVTMV VPGMDVCMNK 420 QHRSTGSSPD QLLVQIKNAC RRHGARIAGE NASLVMTHTS SFSRIRSNIL TTERVRPSHF 480 TYQRMGADFF SPKHWPAFTE FVRSVVCGEW DEDDADADMA AANAAGRRDN AWETQLV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 4.0e-81 | 101 | 503 | 414 | + beta-amylase | ||
| PLN02161 | PLN02161 | 6.0e-89 | 82 | 505 | 437 | + beta-amylase | ||
| PLN02801 | PLN02801 | 4.0e-96 | 82 | 503 | 441 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-104 | 82 | 503 | 432 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-117 | 82 | 505 | 434 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN35504.1 | 0 | 1 | 518 | 7 | 512 | unknown [Zea mays] |
| GenBank | ADD91317.1 | 0 | 1 | 519 | 1 | 512 | chloroplast beta-amylase [Musa acuminata AAA Group] |
| GenBank | EAZ05063.1 | 0 | 1 | 520 | 4 | 512 | hypothetical protein OsI_27252 [Oryza sativa Indica Group] |
| RefSeq | NP_001060573.1 | 0 | 1 | 520 | 4 | 512 | Os07g0667100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463351.1 | 0 | 3 | 518 | 6 | 513 | hypothetical protein SORBIDRAFT_02g042220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1q6g_A | 0 | 82 | 502 | 14 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 82 | 502 | 14 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wds_A | 0 | 82 | 502 | 14 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1wdr_A | 0 | 82 | 502 | 14 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1wdp_A | 0 | 82 | 502 | 14 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781436 | 389 | 122 | 505 | 0 |
| HO853900 | 349 | 157 | 503 | 0 |
| HO796964 | 360 | 146 | 505 | 0 |
| EG631213 | 322 | 184 | 505 | 0 |
| HO781436 | 67 | 72 | 138 | 0.0000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
