y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g20370.1 |
Family | CBM43 |
Protein Properties | Length: 233 Molecular Weight: 23620.8 Isoelectric Point: 8.3113 |
Chromosome | Chromosome/Scaffold: 1 Start: 16322429 End: 16323986 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 79 | 160 | 1.6e-29 |
CVAIQSADPAALQRGLNYACGPGRADCSAIQPGGVCYKQNNLPALASYAYNDYYHRNAATGATCSFDGTATTTPTDPSSGQC |
Full Sequence |
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Protein Sequence Length: 233 Download |
MSYATSLNLG RFSCRTTLLK IGVWGSGTRM LCRRFQGCSL LLLLLVILSN ASGSLSSEAE 60 EAETGKRRSL AAGAGGLFCV AIQSADPAAL QRGLNYACGP GRADCSAIQP GGVCYKQNNL 120 PALASYAYND YYHRNAATGA TCSFDGTATT TPTDPSSGQC IFAGSSMAGG SNSTTPAASA 180 PSALVPPSST FTPGIGGGPG SAFTPYDAAD SAMAAARRAL LLMIPLVVFL FS* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-16 | 77 | 149 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-32 | 77 | 162 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC82508.1 | 0 | 7 | 230 | 13 | 248 | hypothetical protein OsI_26988 [Oryza sativa Indica Group] |
GenBank | EEE67655.1 | 0 | 18 | 230 | 38 | 263 | hypothetical protein OsJ_25253 [Oryza sativa Japonica Group] |
RefSeq | NP_001060371.1 | 0 | 30 | 230 | 1 | 214 | Os07g0633100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150091.1 | 0 | 18 | 220 | 1 | 198 | LOC100283720 [Zea mays] |
RefSeq | XP_002463238.1 | 0 | 18 | 220 | 1 | 194 | hypothetical protein SORBIDRAFT_02g040340 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.0000000000009 | 74 | 166 | 9 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |