| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g25440.1 |
| Family | GH14 |
| Protein Properties | Length: 489 Molecular Weight: 54910.1 Isoelectric Point: 5.139 |
| Chromosome | Chromosome/Scaffold: 1 Start: 20669626 End: 20672534 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 14 | 432 | 0 |
| VMLPLDVVSVDNKFEKGDKLRAQLKKLTEAGVDGVMIDVWWGLVEGKGPKAYDWSAYKQVFELVQEAGLKLQAIMSFHQCGGNVGDVVNIPIPQWVRDIG ATDPDIFCTNRSGKRNIEYLTLGVDDQPLFHGRTAIQMYTDYMASFRENMKEFLNAGVIVDIEVGLGPAGEMRYPSYPQSQGWVFPGIGEFICYDKYLVA DFKAAAAKAGHPEWELPDDAGEYNDTPEKTQFFKDNGTYVTEKGDFFLSWYSNKLIKHGDKILDEANKVFVGYTVQLAIKISGIHWWYRVPNHAAELTAG YYNLDDRDGYRTIARMLKRHHASLNFTCAEMRDSEQSSEAKSAPEELVQQVLSAGWREGLDVACENALGRYDATGYNTILRNARPKGVNKSGPPEHKLHG FTYLRLSDELLQGQNYVTF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MAGSLLANYV QVNVMLPLDV VSVDNKFEKG DKLRAQLKKL TEAGVDGVMI DVWWGLVEGK 60 GPKAYDWSAY KQVFELVQEA GLKLQAIMSF HQCGGNVGDV VNIPIPQWVR DIGATDPDIF 120 CTNRSGKRNI EYLTLGVDDQ PLFHGRTAIQ MYTDYMASFR ENMKEFLNAG VIVDIEVGLG 180 PAGEMRYPSY PQSQGWVFPG IGEFICYDKY LVADFKAAAA KAGHPEWELP DDAGEYNDTP 240 EKTQFFKDNG TYVTEKGDFF LSWYSNKLIK HGDKILDEAN KVFVGYTVQL AIKISGIHWW 300 YRVPNHAAEL TAGYYNLDDR DGYRTIARML KRHHASLNFT CAEMRDSEQS SEAKSAPEEL 360 VQQVLSAGWR EGLDVACENA LGRYDATGYN TILRNARPKG VNKSGPPEHK LHGFTYLRLS 420 DELLQGQNYV TFQTFVKRMH ANQDHDPSVD PIAPLERSTP EMPIQKILQA AQPKLDPFPF 480 DENTDLPV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 6.0e-127 | 9 | 440 | 435 | + beta-amylase | ||
| PLN00197 | PLN00197 | 1.0e-158 | 10 | 446 | 441 | + beta-amylase; Provisional | ||
| PLN02905 | PLN02905 | 1.0e-162 | 9 | 440 | 436 | + beta-amylase | ||
| PLN02803 | PLN02803 | 3.0e-179 | 10 | 439 | 433 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 5 | 488 | 488 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX37357.1 | 0 | 1 | 488 | 1 | 488 | tissue-ubiquitous beta-amylase 2 [Hordeum vulgare subsp. vulgare] |
| DDBJ | BAH93971.1 | 0 | 1 | 488 | 942 | 1429 | Os07g0543200 [Oryza sativa Japonica Group] |
| EMBL | CAA77817.1 | 0 | 1 | 488 | 1 | 488 | Beta-amylase [Secale cereale] |
| RefSeq | NP_001059907.1 | 0 | 1 | 488 | 533 | 1020 | Os07g0543300 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | P93594 | 0 | 1 | 488 | 1 | 488 | AMYB_WHEAT RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xgi_A | 0 | 1 | 488 | 1 | 488 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xgb_A | 0 | 1 | 488 | 1 | 488 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xg9_A | 0 | 1 | 488 | 1 | 488 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xfy_A | 0 | 1 | 488 | 1 | 488 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 2xfr_A | 0 | 1 | 488 | 1 | 488 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 468 | 27 | 488 | 0 |
| HO803971 | 392 | 88 | 473 | 0 |
| DY266204 | 323 | 158 | 480 | 0 |
| DV474839 | 271 | 1 | 271 | 0 |
| DV475494 | 267 | 1 | 267 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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