| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g26287.3 |
| Family | GH33 |
| Protein Properties | Length: 370 Molecular Weight: 41204 Isoelectric Point: 6.7833 |
| Chromosome | Chromosome/Scaffold: 1 Start: 21342816 End: 21345776 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH33 | 96 | 368 | 1.5e-28 |
| PAGTAPFNSCHASTIVEVEKDNFLVAYFGGSKEGAPDVKIWLQRYGDGYWHPPKVADEQDEVPMWNPVLFKLPSRELLLFYKIGQEVQKWSGAMKRSLDG GISWSQREQLPAGILGPIKNKPFLLEDGRLLCGSSVESWNSWGAWLEVTKDAGRTWRKYGPIYVEGETLGVIQPVPYQTANGTIRVLLRSFETIGRVCMA DSIDGGVTWSYVHKTELPNPNSGIDGVKMKDGRVLLAYNTFSRGTLKIAISTDDGDSWKEVMTLEDTKACSSS | |||
| Full Sequence |
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| Protein Sequence Length: 370 Download |
| MLIHSCCKQQ TGLIATACVL LFFLLLFIFD SPHTIFLKKQ HFHVTVASSR SLREIDTNSR 60 PVHDDSRMED STHNTTNSTA SKMSGWIILK EELTFPAGTA PFNSCHASTI VEVEKDNFLV 120 AYFGGSKEGA PDVKIWLQRY GDGYWHPPKV ADEQDEVPMW NPVLFKLPSR ELLLFYKIGQ 180 EVQKWSGAMK RSLDGGISWS QREQLPAGIL GPIKNKPFLL EDGRLLCGSS VESWNSWGAW 240 LEVTKDAGRT WRKYGPIYVE GETLGVIQPV PYQTANGTIR VLLRSFETIG RVCMADSIDG 300 GVTWSYVHKT ELPNPNSGID GVKMKDGRVL LAYNTFSRGT LKIAISTDDG DSWKEVMTLE 360 DTKACSSST* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 8.0e-6 | 123 | 356 | 274 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 2.0e-21 | 101 | 360 | 315 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 3.0e-85 | 116 | 368 | 268 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82140.1 | 0 | 3 | 368 | 4 | 388 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEC82140.1 | 0 | 112 | 368 | 421 | 651 | hypothetical protein OsI_26191 [Oryza sativa Indica Group] |
| GenBank | EEE67268.1 | 0 | 3 | 368 | 504 | 888 | hypothetical protein OsJ_24447 [Oryza sativa Japonica Group] |
| GenBank | EEE67268.1 | 0 | 112 | 368 | 921 | 1151 | hypothetical protein OsJ_24447 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059779.1 | 0 | 3 | 368 | 4 | 388 | Os07g0516000 [Oryza sativa (japonica cultivar-group)] |
