Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g26470.1 |
Family | AA1 |
Protein Properties | Length: 544 Molecular Weight: 60003 Isoelectric Point: 9.5546 |
Chromosome | Chromosome/Scaffold: 1 Start: 21504203 End: 21509276 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 35 | 498 | 0 |
VTYGDIFPLGVKQQGILINGQFPGPQIDAVTNDNLVVNVYNNLNEPFLLSWNGVQQRRNSFEDGVAGTTCPIPPGRNFTYILQVKDQIGTYFYFPSLAFH KAAGGFGGIRVLSRPMIPVPFPPPAADFTALIGDWYKTNHTDLRYILDSGKTLGFPDGLLINGRGWNGYTFTVQPGKTYRFRITNVGLATSLNIRFQGHT MKLVEVEGSHTLQSIYSSLDVHLGQSYSVLVTADQPGFDYPIVVSTRFTSKIISTTAVLHYTNSAGKAPGPLPGGPTTQIDWSLNQARSVRWNLTASGPR PNPQGSYHYGQVPTTKTIRLANSAAIINGKQRYAVNGVSFVNADTPLKIADYYKIPGVFSVGTISDSPTSGGAYLKTSVMGADYRGYVEIVFENSENEVQ SWHIDGYAFWVVGMNGGQWSSASRQIYNLRDAVSRYTLQVYPNAWTAIYMPLDNVGMWNVRSEN |
Full Sequence |
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Protein Sequence Length: 544 Download |
MAASGASAVA LLVFLPLLSV LVGGEDPYRF FTWNVTYGDI FPLGVKQQGI LINGQFPGPQ 60 IDAVTNDNLV VNVYNNLNEP FLLSWNGVQQ RRNSFEDGVA GTTCPIPPGR NFTYILQVKD 120 QIGTYFYFPS LAFHKAAGGF GGIRVLSRPM IPVPFPPPAA DFTALIGDWY KTNHTDLRYI 180 LDSGKTLGFP DGLLINGRGW NGYTFTVQPG KTYRFRITNV GLATSLNIRF QGHTMKLVEV 240 EGSHTLQSIY SSLDVHLGQS YSVLVTADQP GFDYPIVVST RFTSKIISTT AVLHYTNSAG 300 KAPGPLPGGP TTQIDWSLNQ ARSVRWNLTA SGPRPNPQGS YHYGQVPTTK TIRLANSAAI 360 INGKQRYAVN GVSFVNADTP LKIADYYKIP GVFSVGTISD SPTSGGAYLK TSVMGADYRG 420 YVEIVFENSE NEVQSWHIDG YAFWVVGMNG GQWSSASRQI YNLRDAVSRY TLQVYPNAWT 480 AIYMPLDNVG MWNVRSENWA RQYLGQQFYL RVWTPSTSWR DEFPIPKNAL LCGRAAGRRT 540 RPL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 24 | 543 | 521 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 24 | 540 | 517 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 25 | 540 | 519 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 24 | 537 | 522 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 27 | 534 | 519 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL53812.1 | 0 | 25 | 543 | 30 | 550 | unknown [Zea mays] |
GenBank | EEC82126.1 | 0 | 1 | 543 | 1 | 546 | hypothetical protein OsI_26158 [Oryza sativa Indica Group] |
GenBank | EEE67250.1 | 0 | 1 | 543 | 1 | 546 | hypothetical protein OsJ_24405 [Oryza sativa Japonica Group] |
RefSeq | NP_001059758.1 | 0 | 1 | 543 | 1 | 563 | Os07g0510900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002460757.1 | 0 | 23 | 543 | 28 | 548 | hypothetical protein SORBIDRAFT_02g034420 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 536 | 4 | 542 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1asq_A | 0 | 29 | 536 | 4 | 542 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1asp_B | 0 | 29 | 536 | 4 | 542 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1asp_A | 0 | 29 | 536 | 4 | 542 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 1aso_B | 0 | 29 | 536 | 4 | 542 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |