| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g26830.1 |
| Family | CBM57 |
| Protein Properties | Length: 642 Molecular Weight: 70474.3 Isoelectric Point: 6.5096 |
| Chromosome | Chromosome/Scaffold: 1 Start: 21899958 End: 21905618 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 220 | 374 | 5.5e-25 |
| AFDEDLNGIHWGGDRFWLGLKTLSSSSDDQPVSTENVIAETLLAPNFYPQSMYQSAIMGTDRQPSLSFEMDVTPNKNYSVWLHFAEIENGITAEEQRVFD VIINGDIAFKDIDIVRMTGERFTALVLNKTIAVSGTTLKITLQPVEGTRAIVSAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 642 Download |
| MRQRSLALLL LLRLRLWLFA VAASPALLGV LAADLNKEPF TIRISCGSFD DVHTAPTNTL 60 WYRDFGYTGG RFANATRPSY IIPPLKTLRY FPLSDGPENC YYINNVPNGH YQVRLFFALV 120 ADPNLDSEPI FDVSVEGTLF SSLLSGWSSD DEMTFAEALV FVQDSSLSIC FHSTGHGDPS 180 ILSIEVLQID DNAYKFGPLW GNGTVLRTAK RLTCGSGKPA FDEDLNGIHW GGDRFWLGLK 240 TLSSSSDDQP VSTENVIAET LLAPNFYPQS MYQSAIMGTD RQPSLSFEMD VTPNKNYSVW 300 LHFAEIENGI TAEEQRVFDV IINGDIAFKD IDIVRMTGER FTALVLNKTI AVSGTTLKIT 360 LQPVEGTRAI VSAIEVFEII PAEMKTLTQE VTALRTLKGS LGLPLRFGWN GDPCVPQQHP 420 WSGVDCQFDD TKMHWVIDGL GLDNQGLGGV IPIDVSKLQH LESINFSGNS IKGNIPFTLG 480 TISGLRVLDL SYNKLNGSIP ESLGQLTSLQ TLNLNGNGLS GRVPASLGGR PLHRVRFNFT 540 DNAGLCGIPG LHECGPHISV AAKIGMAFGV LLAFLFLVVF AACWWKRRQN IIRGQKLAAA 600 REAPYAKSRT QFTRDVQMAK HHRPHESSRG SNNESSPHLL S* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 1.0e-5 | 43 | 184 | 156 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 2.0e-12 | 451 | 528 | 78 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 7.0e-16 | 214 | 374 | 173 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-67 | 44 | 379 | 354 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 24 | 641 | 618 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 39 | 641 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ39920.1 | 0 | 20 | 640 | 19 | 591 | hypothetical protein OsJ_24359 [Oryza sativa Japonica Group] |
| RefSeq | NP_001059721.1 | 0 | 20 | 640 | 19 | 636 | Os07g0501800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002279791.1 | 0 | 42 | 641 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002462899.1 | 0 | 29 | 641 | 27 | 639 | hypothetical protein SORBIDRAFT_02g034070 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.000000000001 | 412 | 556 | 611 | 750 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 3rgz_A | 0.000000006 | 440 | 527 | 399 | 486 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 3rgz_A | 0.0000003 | 436 | 527 | 467 | 558 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 3rgz_A | 0.0000008 | 447 | 528 | 454 | 535 | A Chain A, Golgi Alpha-Mannosidase Ii |
| PDB | 3rgz_A | 0.000002 | 436 | 560 | 295 | 423 | A Chain A, Golgi Alpha-Mannosidase Ii |
