Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g31870.1 |
Family | CBM43 |
Protein Properties | Length: 188 Molecular Weight: 20101.1 Isoelectric Point: 6.8819 |
Chromosome | Chromosome/Scaffold: 1 Start: 27316740 End: 27317813 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 101 | 182 | 1.5e-32 |
WCVANPTVESEEVQAAMDYACGSGADCDAAAPGGPCFLPDTLMAHASHAFNSYWQRAKVAGGTCDFAGAAMLITRDPSYDDC |
Full Sequence |
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Protein Sequence Length: 188 Download |
MELMMMMVIK KHPMILLALI MSIQHDSKAN GASVTITRDW RYYQSYLANP PYKYQIGVGG 60 SPSPAPAPAP PPYCAYPPPP PPPASPRGAA PRQPARTQGL WCVANPTVES EEVQAAMDYA 120 CGSGADCDAA APGGPCFLPD TLMAHASHAF NSYWQRAKVA GGTCDFAGAA MLITRDPSYD 180 DCRYVFM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-12 | 100 | 171 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-29 | 100 | 184 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD45386.1 | 6.00036e-42 | 5 | 178 | 1 | 207 | hypothetical protein [Oryza sativa Japonica Group] |
EMBL | CBI34142.1 | 3e-37 | 60 | 186 | 108 | 252 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ01995.1 | 0 | 5 | 187 | 1 | 216 | hypothetical protein OsI_24027 [Oryza sativa Indica Group] |
GenBank | EAZ37928.1 | 0 | 5 | 187 | 1 | 216 | hypothetical protein OsJ_22279 [Oryza sativa Japonica Group] |
RefSeq | XP_002516415.1 | 3e-38 | 98 | 186 | 174 | 262 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-18 | 89 | 184 | 1 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |