Basic Information | |
---|---|
Species | Brachypodium distachyon |
Cazyme ID | Bradi1g36460.1 |
Family | GH17 |
Protein Properties | Length: 438 Molecular Weight: 47745.6 Isoelectric Point: 8.1854 |
Chromosome | Chromosome/Scaffold: 1 Start: 32113754 End: 32116259 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 84 | 399 | 0 |
GINYGRIANNIPSPDKVVALLRSSKIRNVKIYDADHSVLDTFKGTGLNLVIAVNNGLLKDFAANESSAIDWLKDNVQPYLPQTRIVGITVGNEVLGGDPS LAEPLIGAVKNVYNGLKKLHLEDKIELFSPHSEAVFANSYPPSACVFNDNVMVYMKQLLDFFSRIGSPFYVNAYPFLAYISDPEHIDINYALFQPNPGIL DPNTSLHYDNMFDAQVDAAYAALKAAGYNDMEVRVAETGWASSGDQNEVGASVENARTYNFNLRKRLFLRKGTPLKPKIPVKAYIFALFNENSKPGPSSE KHYGLFNADGRISYDI |
Full Sequence |
---|
Protein Sequence Length: 438 Download |
MPRPGSKLRN EARLACPSDA SAGSVARRDG GSCSGPGDCG GLAAIMVMGR RRCAHWMVPL 60 FCCLLLAFPS HGPRAVEAFV GAYGINYGRI ANNIPSPDKV VALLRSSKIR NVKIYDADHS 120 VLDTFKGTGL NLVIAVNNGL LKDFAANESS AIDWLKDNVQ PYLPQTRIVG ITVGNEVLGG 180 DPSLAEPLIG AVKNVYNGLK KLHLEDKIEL FSPHSEAVFA NSYPPSACVF NDNVMVYMKQ 240 LLDFFSRIGS PFYVNAYPFL AYISDPEHID INYALFQPNP GILDPNTSLH YDNMFDAQVD 300 AAYAALKAAG YNDMEVRVAE TGWASSGDQN EVGASVENAR TYNFNLRKRL FLRKGTPLKP 360 KIPVKAYIFA LFNENSKPGP SSEKHYGLFN ADGRISYDIG YSGLLPSSAP SSLLSMKKMR 420 AGDWIVHCLA AVFYFFF* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 69 | 392 | 335 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-86 | 84 | 401 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF33176.1 | 0 | 46 | 437 | 3 | 399 | beta-1,3-glucanase [Triticum aestivum] |
DDBJ | BAF49603.1 | 0 | 1 | 437 | 1 | 436 | beta-1,3-glucanase [Agrostis alba] |
RefSeq | NP_001058028.1 | 0 | 1 | 422 | 1 | 411 | Os06g0607000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130934.1 | 0 | 57 | 433 | 5 | 382 | hypothetical protein LOC100192039 [Zea mays] |
RefSeq | XP_002437258.1 | 0 | 72 | 420 | 21 | 370 | hypothetical protein SORBIDRAFT_10g023710 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 84 | 401 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 84 | 401 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 84 | 402 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 84 | 402 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 84 | 402 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
JG933458 | 282 | 81 | 361 | 0 |
GT807799 | 266 | 174 | 437 | 0 |
GT826742 | 232 | 123 | 354 | 0 |
JG911749 | 261 | 123 | 382 | 0 |
JG912149 | 267 | 72 | 337 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|