Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g47867.1 |
Family | GT47 |
Protein Properties | Length: 464 Molecular Weight: 52374.4 Isoelectric Point: 8.7895 |
Chromosome | Chromosome/Scaffold: 1 Start: 46534500 End: 46536271 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 111 | 410 | 0 |
ERRFKVHVYAEGEPPILHAGPCKNIYTIEGRFIEQLELMSPGGAGVRTWDPERAHAFFLPFSVSQMVQFAYVPLSYDRAPLRALVADYVRVVAARHRFWN RSSGADHFMLSCHDWGPEASRGDPELYGNGIRALCNANTSEGFRPGKDVSIPEINLYDGDTPRQLLLPAPGLSERPYLAFFAGGRHGHVRDLLLREWKGR DPDNFPVYEYDLPTTTNTTGGGDKQHDYYSYMQRARFCLCPSGHEVASPRVVEAIHAGCVPVLVSDGYAPPFADVLRWEGFSVSVPVADIPRLREVLESI |
Full Sequence |
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Protein Sequence Length: 464 Download |
MKFHVIGMYG VEHAGEFPFF PLRERRALIF VLCVKQRGAG TARRRRPSVE RELDAARAAI 60 RRAARRGHAD HGGGNASSDW FHGGDSSAEH ARLARVYRNP AAFHRSYVEM ERRFKVHVYA 120 EGEPPILHAG PCKNIYTIEG RFIEQLELMS PGGAGVRTWD PERAHAFFLP FSVSQMVQFA 180 YVPLSYDRAP LRALVADYVR VVAARHRFWN RSSGADHFML SCHDWGPEAS RGDPELYGNG 240 IRALCNANTS EGFRPGKDVS IPEINLYDGD TPRQLLLPAP GLSERPYLAF FAGGRHGHVR 300 DLLLREWKGR DPDNFPVYEY DLPTTTNTTG GGDKQHDYYS YMQRARFCLC PSGHEVASPR 360 VVEAIHAGCV PVLVSDGYAP PFADVLRWEG FSVSVPVADI PRLREVLESI PAAEVERLRD 420 GGRLVKQHFT LRQPPERLDM FHMILHSVWL RRLNFRLNDH LSS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13692 | Glyco_trans_1_4 | 0.006 | 337 | 391 | 56 | + Glycosyl transferases group 1. | ||
pfam03016 | Exostosin | 1.0e-61 | 110 | 410 | 318 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD44815.1 | 0 | 47 | 460 | 64 | 514 | putative pectin-glucuronyltransferase [Oryza sativa Japonica Group] |
EMBL | CAH67778.1 | 0 | 49 | 458 | 39 | 440 | H0201G08.5 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC80122.1 | 0 | 47 | 460 | 64 | 545 | hypothetical protein OsI_21883 [Oryza sativa Indica Group] |
RefSeq | NP_001052025.1 | 0 | 49 | 458 | 39 | 440 | Os04g0109900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002437936.1 | 0 | 105 | 449 | 52 | 402 | hypothetical protein SORBIDRAFT_10g005120 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE679499 | 243 | 216 | 458 | 0 |
GR362032 | 185 | 276 | 458 | 0 |
GE475605 | 300 | 158 | 457 | 0 |
FE523338 | 313 | 85 | 396 | 0 |
DR923559 | 250 | 209 | 458 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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