Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g48610.1 |
Family | GT5 |
Protein Properties | Length: 657 Molecular Weight: 72122.1 Isoelectric Point: 5.7576 |
Chromosome | Chromosome/Scaffold: 1 Start: 47249027 End: 47255499 |
Description | Glycogen/starch synthases, ADP-glucose type |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 150 | 646 | 0 |
IVFVTGEAAPYAKSGGLGDVCGSLPIALAARGHRVMVVMPRYLNGSSDKNYAKAFYTGKNIKIPCFGGSHEVTYFHEYRDNVDWVFVDHPSYHRPGSLYG DNFGAFGDNQFRYTLLCYAACEAPLILELGGYIYGQNCMFVVNDWHASLVPVLLAAKYRPYGVYRDSRSTLVIHNLAHQGVEPASTYPDLGLPPEWYGAL EWVFPEWARRHALDKGEAVNFLKGAVVTSDRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPTMDKCLPYHYSVDDLSGKAKCKA ELQKELGLPIRPDIPLIGFIGRLDYQKGIDLIKLAIPDLMRDDVQFVMLGSGDPVFEGWMRSTESSYKDKFRGWVGFSIPVSHRITAGCDILLMPSRFEP CGLNQLYAMQYGTVPVVHETGGLRDTVQTFNPFGKTGEEGTGWAFSPLTVDKMLWALRTAMTTFREHKPSWEGLMKRGMSKDHTWDHAAEQYEQIFE |
Full Sequence |
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Protein Sequence Length: 657 Download |
MATPGVGLGA ACLAAAASVA PRRRADPAAP LARRARLLRR VVRGRCVAEL SREGAPAAPS 60 QPPVPRPLPS ADQQLPPPVL PSFLAPTEAP APTPLPLPDA DAGVGELGPE LDIQGIAEDY 120 IDSTDVAASE QDSEIMDAKE QSQAKVTRSI VFVTGEAAPY AKSGGLGDVC GSLPIALAAR 180 GHRVMVVMPR YLNGSSDKNY AKAFYTGKNI KIPCFGGSHE VTYFHEYRDN VDWVFVDHPS 240 YHRPGSLYGD NFGAFGDNQF RYTLLCYAAC EAPLILELGG YIYGQNCMFV VNDWHASLVP 300 VLLAAKYRPY GVYRDSRSTL VIHNLAHQGV EPASTYPDLG LPPEWYGALE WVFPEWARRH 360 ALDKGEAVNF LKGAVVTSDR IVTVSQGYSW EVTTAEGGQG LNELLSSRKS VLNGIVNGID 420 INDWNPTMDK CLPYHYSVDD LSGKAKCKAE LQKELGLPIR PDIPLIGFIG RLDYQKGIDL 480 IKLAIPDLMR DDVQFVMLGS GDPVFEGWMR STESSYKDKF RGWVGFSIPV SHRITAGCDI 540 LLMPSRFEPC GLNQLYAMQY GTVPVVHETG GLRDTVQTFN PFGKTGEEGT GWAFSPLTVD 600 KMLWALRTAM TTFREHKPSW EGLMKRGMSK DHTWDHAAEQ YEQIFEWAFV DQPYVM* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-99 | 149 | 645 | 510 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 3.0e-144 | 150 | 648 | 504 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 3.0e-175 | 150 | 646 | 506 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 150 | 647 | 498 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 0 | 150 | 646 | 500 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD54661.1 | 0 | 6 | 656 | 4 | 647 | starch synthase I [Triticum aestivum] |
GenBank | AAF03557.1 | 0 | 6 | 656 | 4 | 647 | starch synthase I [Aegilops tauschii] |
GenBank | AAF37876.1 | 0 | 6 | 656 | 4 | 643 | AF234163_1 starch synthase I [Hordeum vulgare subsp. vulgare] |
EMBL | CAB99209.1 | 0 | 6 | 656 | 4 | 647 | starch synthase I-1 [Triticum aestivum] |
Swiss-Prot | Q43654 | 0 | 6 | 656 | 4 | 647 | SSY1_WHEAT RecName: Full=Starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Starch synthase I-2; Short=SS I-2; Short=SS I; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 149 | 645 | 11 | 508 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
PDB | 3vue_A | 0 | 149 | 645 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 149 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 149 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 149 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO595058 | 491 | 165 | 654 | 0 |
GO872237 | 346 | 308 | 653 | 0 |
GO885224 | 352 | 118 | 469 | 0 |
GO885136 | 336 | 118 | 453 | 0 |
GO842198 | 335 | 172 | 506 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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