Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g50090.1 |
Family | GT5 |
Protein Properties | Length: 604 Molecular Weight: 65577.4 Isoelectric Point: 7.4343 |
Chromosome | Chromosome/Scaffold: 1 Start: 48730388 End: 48733987 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 78 | 574 | 0 |
NIVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVGDSYEMVRFFHCYKRGVDRVFVDHPWFLEKVWGKTGEKIY GPDTGTDYKDNQLRFSLLCQAALEVPRILSLDNNPFYSGPYGEDVVFVCNDWHTGPLACYLKNSYQSNGIYRTAKVAFCIHNISYQGRFSLDDFSLLNLP ARFKSSFDFIDGYDKPVEGPKINWMKGGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFIAVKYDASTAVEGKAL NKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVIAAAIPEILDEDVQIVLLGTGKKKFERLFKSLEERFPEKVRAVVKFNAPLAHYIMAGADLLAVTSR FEPCGLIQLQGMRYGTPCACASTGGLVDTIVEGETGFHMGRLSVDCNVVEPEDVKKVATTLKRAVKVVGTPAHQEMVRNCMAQDLSWKGPAKNWEEV |
Full Sequence |
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Protein Sequence Length: 604 Download |
MAALVTSQLA ATCAGMPPPP SSVLRRGHHG KIVGMRTTAR ATAPARRTTT TPQRGGRIIR 60 RASAVVRAGA GATGAGMNIV FVGAEMAPWS KTGGLGDVLG GLPPAMAANG HRVMVISPRY 120 DQYKDAWDTS VVAEIKVGDS YEMVRFFHCY KRGVDRVFVD HPWFLEKVWG KTGEKIYGPD 180 TGTDYKDNQL RFSLLCQAAL EVPRILSLDN NPFYSGPYGE DVVFVCNDWH TGPLACYLKN 240 SYQSNGIYRT AKVAFCIHNI SYQGRFSLDD FSLLNLPARF KSSFDFIDGY DKPVEGPKIN 300 WMKGGILEAD RVLTVSPYYA EELISGIARG CELDNIMRLT GITGIVNGMD VSEWDPTKDK 360 FIAVKYDAST AVEGKALNKE ALQAEVGLPV DRKVPLVAFI GRLEEQKGPD VIAAAIPEIL 420 DEDVQIVLLG TGKKKFERLF KSLEERFPEK VRAVVKFNAP LAHYIMAGAD LLAVTSRFEP 480 CGLIQLQGMR YGTPCACAST GGLVDTIVEG ETGFHMGRLS VDCNVVEPED VKKVATTLKR 540 AVKVVGTPAH QEMVRNCMAQ DLSWKGPAKN WEEVLLGLGV AGSEPGIVGE EIAPLAKENV 600 AAP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 3.0e-75 | 77 | 573 | 521 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 4.0e-108 | 77 | 573 | 516 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 4.0e-133 | 77 | 574 | 510 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 3.0e-166 | 77 | 578 | 516 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-172 | 78 | 575 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABU98325.1 | 0 | 1 | 603 | 1 | 609 | granule-bound starch synthase I [Oryza australiensis] |
GenBank | ABU98330.1 | 0 | 1 | 603 | 1 | 603 | granule-bound starch synthase I [Austrostipa aristiglumis] |
GenBank | ABU98332.1 | 0 | 1 | 603 | 1 | 601 | granule-bound starch synthase I [Microlaena stipoides] |
DDBJ | BAC41202.1 | 0 | 1 | 603 | 1 | 608 | granule bound starch synthase I [Hordeum vulgare subsp. vulgare] |
RefSeq | NP_001056704.1 | 0 | 1 | 603 | 1 | 609 | Os06g0133000 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 77 | 603 | 10 | 536 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3vue_A | 0 | 77 | 603 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 77 | 574 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 77 | 574 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 77 | 574 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ568414 | 528 | 77 | 604 | 0 |
HO825853 | 518 | 85 | 602 | 0 |
HO629148 | 529 | 77 | 604 | 0 |
DT643443 | 304 | 109 | 412 | 0 |
DV516889 | 292 | 121 | 412 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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