y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g60380.1 |
Family | CE8 |
Protein Properties | Length: 613 Molecular Weight: 66809.1 Isoelectric Point: 4.9786 |
Chromosome | Chromosome/Scaffold: 1 Start: 59739601 End: 59741522 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 300 | 594 | 0 |
NVTVAKDGSGNFANISGALDAMPQNHSGRYVIYVKEGVYDEQVNITNGMANITLYGDGAKKSIITGSKNVADGVRMWRTATLAVDGDRFMAVKLGIQNTA GDEKQQALALRVKADRAIFFNCRIDGNQDTLFAQAYRQYYRSCIISGTIDFIFGDAAAIFQRCVILVKAPLPGKPAVVTAHGRRDRQQTTGFVLHRTRIV AEERLAETSSTVKTFLARPWKEFSRTIVLESIIDGFVHPQGYMPWEGKDNLGTAFYGEFANVGKGSNVTARQEMKGFHVLDKEKAMQFTVEHFVN |
Full Sequence |
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Protein Sequence Length: 613 Download |
MSSSSRGVEA EEDQNASRTR LLVGGISVFL LIGVVAGTAA FFLTEKADED TQESKRNMST 60 TMRTVDLFCA PTDYRATCQE TLEKTLERSK DPSDQTHAAA AAAITAVGRE LGKGFNRSSL 120 LDAVRESNDT LVHEALRDCK MLLDDCAADV TRALDNVANR GVDGPAQDLQ AWLSAVITFQ 180 GSCVDMFPKG EIRDEIKEIM EKAREISSNA IAIIQQGAAL SAMLEIDQGE SLTVENVKDA 240 AAAVDDDTQN NPNNDRRLQG RESALVFPSW VPHEDRKLLD AAQEGDGDGE EEHKGGLTPN 300 VTVAKDGSGN FANISGALDA MPQNHSGRYV IYVKEGVYDE QVNITNGMAN ITLYGDGAKK 360 SIITGSKNVA DGVRMWRTAT LAVDGDRFMA VKLGIQNTAG DEKQQALALR VKADRAIFFN 420 CRIDGNQDTL FAQAYRQYYR SCIISGTIDF IFGDAAAIFQ RCVILVKAPL PGKPAVVTAH 480 GRRDRQQTTG FVLHRTRIVA EERLAETSST VKTFLARPWK EFSRTIVLES IIDGFVHPQG 540 YMPWEGKDNL GTAFYGEFAN VGKGSNVTAR QEMKGFHVLD KEKAMQFTVE HFVNGAEWIP 600 ETGTPVRLGL FG* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 1.0e-126 | 9 | 605 | 620 | + pectinesterase | ||
PLN02990 | PLN02990 | 8.0e-129 | 21 | 605 | 593 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 1.0e-131 | 12 | 611 | 605 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-147 | 300 | 595 | 297 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 12 | 611 | 618 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY90351.1 | 0 | 46 | 612 | 38 | 602 | hypothetical protein OsI_11933 [Oryza sativa Indica Group] |
RefSeq | NP_001050306.1 | 0 | 46 | 612 | 38 | 602 | Os03g0399000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002324181.1 | 0 | 53 | 611 | 67 | 593 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002467727.1 | 0 | 53 | 612 | 44 | 593 | hypothetical protein SORBIDRAFT_01g033140 [Sorghum bicolor] |
RefSeq | XP_002516193.1 | 0 | 46 | 611 | 61 | 593 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 297 | 611 | 1 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 299 | 610 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 3e-18 | 298 | 600 | 3 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 3e-18 | 298 | 600 | 3 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 3e-18 | 298 | 600 | 3 | 339 | A Chain A, Pectin Methylesterase From Carrot |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |