| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g62400.1 |
| Family | GH14 |
| Protein Properties | Length: 519 Molecular Weight: 55108.9 Isoelectric Point: 5.6805 |
| Chromosome | Chromosome/Scaffold: 1 Start: 61645584 End: 61647544 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 81 | 471 | 0 |
| FVGLPADVVTDGKALKCSRAVKAGLRALKLLGVDGVELPVSWAVVQPGSDDDGHQFEWAGYLAVAGMVRDAGLGLRVSFLTHGAALPGWAADADILLADR SGNRHEGCLSFAVDELPVLAGKSPIEAYEAFFRSFADAFHGFLGSTITDVTVSLGPNGELRYPSYPPPGSDCAVEDAYLGVGEFQCYDKHMLARLKLHAD SSGQPLWGLSGPHDAPGYGDASPESTGFFREQHTGAYGAFFLSWYAGELLAHGDRVLAAASRAFRGAPVEMSAKVPFFHHSGSTRLAAEATAGLYGGYGP VAEMFARHACTAIVSVAGMPDAEAGEVLARIKDACTERGARFACESASVAAADADPGVWGALLNADRTRPCHFTYQRMGAEFFSPDHWPLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 519 Download |
| MEAVLMQQQA AVLARRRCVR WAAPAGNRLA VVRLGMARRA SWAVRARSGL LARAHLVAER 60 RSKETAGEEE EEEDARATRL FVGLPADVVT DGKALKCSRA VKAGLRALKL LGVDGVELPV 120 SWAVVQPGSD DDGHQFEWAG YLAVAGMVRD AGLGLRVSFL THGAALPGWA ADADILLADR 180 SGNRHEGCLS FAVDELPVLA GKSPIEAYEA FFRSFADAFH GFLGSTITDV TVSLGPNGEL 240 RYPSYPPPGS DCAVEDAYLG VGEFQCYDKH MLARLKLHAD SSGQPLWGLS GPHDAPGYGD 300 ASPESTGFFR EQHTGAYGAF FLSWYAGELL AHGDRVLAAA SRAFRGAPVE MSAKVPFFHH 360 SGSTRLAAEA TAGLYGGYGP VAEMFARHAC TAIVSVAGMP DAEAGEVLAR IKDACTERGA 420 RFACESASVA AADADPGVWG ALLNADRTRP CHFTYQRMGA EFFSPDHWPL FVQFAHALES 480 SSPEETHEDD LPGDGDGFRL AAPSGHAAQG TVKEPQTA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-52 | 80 | 416 | 382 | + beta-amylase | ||
| PLN02161 | PLN02161 | 3.0e-58 | 80 | 480 | 450 | + beta-amylase | ||
| PLN02801 | PLN02801 | 4.0e-63 | 80 | 403 | 357 | + beta-amylase | ||
| PLN00197 | PLN00197 | 6.0e-71 | 59 | 488 | 474 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 6.0e-82 | 80 | 478 | 434 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95933.1 | 0 | 1 | 517 | 1 | 523 | Glycosyl hydrolase family 14 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001060573.1 | 0 | 1 | 491 | 4 | 511 | Os07g0667100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151271.1 | 0 | 15 | 504 | 19 | 520 | beta-amylase [Zea mays] |
| RefSeq | XP_002463351.1 | 0 | 64 | 494 | 64 | 513 | hypothetical protein SORBIDRAFT_02g042220 [Sorghum bicolor] |
| RefSeq | XP_002467860.1 | 0 | 78 | 504 | 85 | 510 | hypothetical protein SORBIDRAFT_01g035370 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdr_A | 0 | 80 | 403 | 14 | 350 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 80 | 403 | 14 | 350 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 80 | 403 | 14 | 350 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 2dqx_A | 0 | 80 | 403 | 14 | 350 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
| PDB | 1uko_D | 0 | 80 | 403 | 14 | 350 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV485124 | 186 | 260 | 445 | 0 |
| FL869001 | 250 | 174 | 419 | 0 |
| FL749726 | 299 | 174 | 468 | 0 |
| CB675455 | 265 | 82 | 337 | 0 |
| EC882298 | 269 | 247 | 504 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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